Rummeliibacillus stabekisii: ATY39_14435
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Entry
ATY39_14435 CDS
T04369
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATY39_14435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rst03021
]
ATY39_14435
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_14435
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATY39_14435
Transcription machinery [BR:
rst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATY39_14435
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATY39_14435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMX00506
UniProt:
A0A143HG89
LinkDB
All DBs
Position
complement(2859596..2863150)
Genome browser
AA seq
1184 aa
AA seq
DB search
MTGQLVQYGQHRKRRSFARIKEVLELPNLIEIQTASNEWFLEEGLREMFHDISPIEDFTG
NLSLEFVDYSLGEPKYDVDECKQRDVTYAAPLRVKVRLLNKETEEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYYHDKTDKNGKKGFGATVIPNRGAWLEYETDAKDIV
YVRIDRTRKLPITVLLRALGFASDQEIIDLIGDNEFLRNTLEKDNTDSTEKALLEIYERL
RPGEPPTVESAKNLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTIAQTLADPETG
EILVEAGTLIDRRVLDRLIPYLENGVGFKTVSKVGGVLEGDIQIQEIKIYAPNDESQKEI
KVISNAYIDEEVKHLTPADVVASVSYFFNLLYGVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSINDTASLVPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNKFG
FIETPYRRVDPETGRLTSHIDYLTADEEDNYVVAQANSPLNPDGSFVEEEVVGRFRGDNS
VFKRDTVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPFVGTG
MEHVDARDSGAAVVAKYPGIVEHVEARTIHVRRIEEIDGKEVKGDLTKYKLQKFTRSNHG
TSINQRPLVKVGDRVQPRDILADGPSMENGELALGRNVVVAFMTWNGYNYEDAVIMNERL
VKNDVYTSVHIEEYESEARDTKLGPEEITRDIPNVGEEALRNLDERGIIRIGAEVNDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLKVPHGAGGIVLDVKVFNREDGDEL
SPGVNQMVRVYIVQKRKIRVGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPLG
VPSRMNIGQVLEIHLGMAARYLGVYMATPVFDGASDEDVWRTMEEAGMNRDGKTVLYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGESVPEAGVPESFKVLIKELQSLGLD
VKMLTIDDEEIELRDTEDDDDLQPNDSFNIASTTEEEASVGSAE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtacggacaacaccgaaagcgtagaagcttcgcgcgtatt
aaagaggtgctagaacttccgaatcttattgagattcaaactgcatctaacgagtggttc
cttgaagaaggattacgtgaaatgtttcatgatatttcaccaattgaagacttcacaggg
aatttatcactagaattcgtcgactatagtctcggagaaccgaaatatgatgtcgatgag
tgtaaacaacgtgacgtaacttatgcagctccattacgagttaaagtgcgtctactcaac
aaagaaacagaagaagtaaaagaacaagaagtattcatgggtgacttcccgcttatgacg
gatacaggtacttttgtaattaatggtgctgaacgcgtcattgtttcccaattagtacga
tcaccaagtgtttactatcacgataaaacagataaaaacggtaaaaaaggctttggtgca
acagttattccaaaccgtggcgcttggcttgaatacgaaacagatgcaaaggatattgta
tatgtccgcattgaccgtacgcgtaaattaccgattacggtattgcttcgcgcgctaggg
tttgcatctgatcaagagattatcgatttgatcggtgacaatgagtttttacgcaatacg
ttggaaaaggacaatacagacagcacagaaaaagcattgcttgaaatctatgagcgtctt
cgtcctggtgaaccaccaacagtagaaagcgcaaaaaatctgttgtattctcgtttcttc
gacccaaaacgctatgacttagcgaatgttggtcgctataaaatgaataaaaagcttcat
atcaaaaatcgtcttttcaaccaaacgatcgctcaaacattagcagatcctgaaacaggc
gagatattagttgaagcaggtacattaatcgaccgtcgcgttttagatcgccttatccct
tatttagaaaatggtgtaggctttaaaaccgtatcaaaagtaggcggtgtccttgaaggc
gatatccaaattcaagagattaagatctatgcaccaaatgacgaatcacaaaaagaaatt
aaagtgatcagcaacgcatacatcgatgaagaagttaaacatcttactcctgctgatgta
gtagcatctgtttcttacttctttaacttgctatatggtgtaggtgatacagatgatatt
gaccatttgggtaaccgtcgtttacgttctgtaggcgaattgttgcaaaatcaattccgt
attggtctttcccgtatggaacgagtggtgcgcgagcgtatgtcaattaacgacactgct
tctctagtgccgcaacaattgatcaatatccgcccagttattgcggcgattaaagagttc
ttcggaagctctcaattgtcacaattcatggaccaaacaaatccattagctgagcttacg
cataaacgccgtctgtccgctttaggacctggtggtttaacgcgtgaacgtgctggcatg
gaagtgcgtgacgttcactattctcactatggccgtatgtgtccgattgagacacctgag
ggtccaaacattggtttgattaactcactatctagttatgcgaaagtaaacaaattcgga
tttatcgaaacaccttaccgtcgcgtagaccctgaaacaggtcgtttaacaagccacatc
gactatttaactgccgatgaagaagataactatgttgtagcgcaagcaaactctccatta
aatccagatggttcgtttgttgaggaagaagttgttggccgtttccgcggtgataactct
gtgtttaaacgtgatacagtcgattacatggacgtctcaccaaaacaagtagtatcagct
gcaacagcttgtatcccattcttagaaaacgatgactccaaccgtgccctaatgggtgcg
aacatgcaacgtcaagctgttcctcttttaaatcctgaagctccattcgttggaacaggt
atggaacacgtagatgctagagattcaggtgcagcagtagttgcgaaatatcctggtatt
gtcgagcatgtagaagcacgtactattcatgtgcgtcgcattgaagaaatcgacggtaaa
gaagttaaaggcgatttaacaaaatataaattacaaaaattcactcgttctaaccacgga
acaagcatcaaccaacgcccgttggtaaaagtcggtgaccgtgttcaacctcgtgatatc
ttagctgatggtccatctatggaaaacggtgagctagcactaggccgaaatgttgtggtt
gcattcatgacatggaacggttacaactatgaagatgctgttatcatgaacgaacgttta
gtgaaaaatgatgtgtatacatctgtacacattgaagagtatgaatcagaagctcgtgat
acaaagctcggacctgaagaaatcactcgcgatattccgaatgtcggtgaagaggcattg
cgcaatcttgacgaacgaggaattatccgtattggtgcggaagtaaatgatggcgatatc
ttagtaggtaaagttactcctaaaggtgtaacagaactaactgcagaagaacgcctatta
cacgcaatcttcggtgaaaaagcgcgtgaagtacgtgatacttctcttaaagtgccacac
ggagcaggcggtattgtactagatgtcaaagtcttcaatcgtgaagatggcgatgaacta
tctccaggtgttaaccaaatggttcgtgtctatattgtccaaaaacgtaaaattcgcgtt
ggggataaaatggccggtcgtcatggtaacaaaggggttatctctcgcatcttgcctgaa
gaagatatgccatacttgccagacggcactccagtagatatcatgttaaatccactaggc
gtaccttctcgtatgaatattggacaggtattggagattcacctaggcatggcagctcgc
tatttaggcgtgtacatggctacaccagtatttgatggtgcttcagacgaagatgtttgg
agaacaatggaagaagccggcatgaaccgtgacggtaaaactgttttatatgatggacgt
acaggcgaaccattcgataaccgcgtttcagttggggttatgtacatgatcaaactggct
cacatggttgacgataaattgcacgctcgttcaacaggcccttactcacttgttacgcaa
caaccacttggcggtaaagcacagttcggtggacaacgtttcggtgagatggaagtatgg
gcgcttgaagcgtatggcgctgcttatactcttcaagaaatcttaacagttaaatccgat
gacgttgtgggtcgtgtgaaaacatacgaagccatcgttaaaggagaaagcgttcctgaa
gcaggcgttccggaatctttcaaagtattaattaaagagcttcagtctttaggtttagac
gtgaaaatgttgactatcgatgatgaagaaatcgaattgcgtgatactgaagatgatgat
gatcttcaaccaaacgattcattcaatattgcttcgactacagaagaagaagcatcagta
ggatcagcagaataa
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