Rummeliibacillus stabekisii: ATY39_15145
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Entry
ATY39_15145 CDS
T04369
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rst
Rummeliibacillus stabekisii
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rst03032
]
ATY39_15145 (gyrB)
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_15145 (gyrB)
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATY39_15145 (gyrB)
DNA replication proteins [BR:
rst03032
]
Prokaryotic type
DNA Topoisomerases
ATY39_15145 (gyrB)
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATY39_15145 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AMX00636
UniProt:
A0A143HGL0
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Position
3007048..3008970
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AA seq
640 aa
AA seq
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MAIEDKSPAAYDADQIQVLEGLEAVRKRPGMYIGTTSSKGLHHLVWEIVDNSIDEALAGY
CTEITVAIEKDNWIRVEDNGRGIPVDTQEKVGKPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSIETDVQVHRDGHIHEIKFERGRTIQPLTIIGDTDHNGTTTRFKADPTI
FKETTVYEYDILAHRIRELAYLNRGITIIIMDERNEEVRKDVYHYEGGIKSYVEQLNENK
EPLHEAIDLKGEKDGISIEIAMQYNSGFASTILSFANNINTYEGGTHESGFKTALTRVIN
DYARKNNLLKDSDANLSGEDVREGLVAIVSIKHPDPQFEGQTKTKLGNSEVSSITNSLFS
ERFERFLLENPTVARTIVDKGLIASRARVAAKKAREMTRRKSALEISSLPGKLADCSSRH
PEECEVYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILSNEEIRAMITAV
GTGIGEEFNLEKARYHKIVIMTDADVDGAHIRTLLLTFFFRFMRPLIEAGYVYIAQPPLF
KIQQGKHVEYCYSDKELQEILERLPSQPKPGIQRYKGLGEMDAEQLWDTTMDPDNRVLLQ
VELDDAIEADRTFEQLMGDNVEPRRQFIHENAVYVENLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaagataaaagccctgcagcttatgatgcagaccagatacaagtattagag
ggactagaagcagtacgtaaacgtccgggtatgtatattggtacgacaagttccaagggg
ctgcaccatcttgtatgggaaatcgtcgacaacagtattgacgaagcattagctggttat
tgtactgaaatcactgttgcgattgaaaaggacaactggatcagagtagaagataacgga
cgaggcatccctgttgatactcaagagaaagtcggtaagccggcagtagaagttatcatg
actgttttgcatgctggtggtaaattcggcggcggcggatataaagtatcaggaggtttg
cacggagtaggtgcatctgttgtaaatgcactttcgattgaaacagacgtgcaagtacac
cgtgacggacacatccatgaaattaagtttgaacgtggcagaacaatccagccgcttaca
atcattggcgatacggaccataatggtactactacccgttttaaagcagatccaaccatt
tttaaagaaaccactgtttatgaatatgacattctagcacaccgtatccgcgaattagct
tatttaaaccgcggtattacgattataattatggatgagcgaaatgaagaagttcgtaaa
gatgtctatcactatgaaggtggtattaaatcttatgtagaacagcttaatgaaaataaa
gagccattgcatgaagcgattgatttaaaaggcgaaaaagatgggatttccattgaaatt
gccatgcagtataattcaggatttgcctctactattttgtcattcgcaaataatatcaat
acgtatgagggtgggactcatgaatcgggcttcaaaacagcattgacgcgtgtgattaat
gactatgcccgaaagaataacctgcttaaggattctgatgccaatttatccggagaagac
gtacgtgaaggtcttgtagcaattgtttctataaagcatccagacccacaatttgaaggt
caaacaaaaacaaagcttggtaattcagaggttagttccattacgaattctctgttctcc
gaacgctttgaacgctttttattagaaaacccaacagttgctagaacaatagtcgataaa
ggtttaattgcatctcgagcacgtgttgcagcgaagaaagcaagagagatgacacgtcgt
aaatctgcgttagagatttcaagtttgccagggaagttggctgattgttcttctcgccat
cctgaagagtgtgaagtatacatcgttgaaggtgactctgccggcggttcggcgaagtct
gggcgtgaccgtcacttccaagctatccttccacttcgcggtaaaatcttaaatgtcgaa
aaagcgcgtctagaccgcattttgtcgaatgaagagatccgtgccatgatcacagctgtc
ggtacaggtatcggtgaagagtttaatttagagaaggcacgttatcataaaatcgtcatc
atgacggatgccgatgtcgatggcgctcatatacgaacgttattattgacattcttcttc
cgttttatgcggccgttaatcgaagcaggctatgtgtacattgcacagccgccactattc
aaaatacagcaaggtaagcatgtcgaatattgctatagcgataaagaattacaggaaatt
ttagagcgtttaccaagccaaccaaagcctggtatccaacgttacaaaggtcttggtgaa
atggatgcggagcaattgtgggatactacaatggatccggataatcgtgttttattgcaa
gtcgaattggacgatgcgattgaagcagatcgtacttttgagcaattaatgggcgataat
gtagaaccaagacgccaatttattcatgaaaatgctgtttatgtagaaaacttagatatt
tag
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