Rummeliibacillus stabekisii: ATY39_16235
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Entry
ATY39_16235 CDS
T04369
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03420
Nucleotide excision repair
rst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATY39_16235
03430 Mismatch repair
ATY39_16235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_16235
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY39_16235
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATY39_16235
MMR (mismatch excision repair)
Other MMR factors
ATY39_16235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
AAA_19
UvrD-helicase
UvrD_C
Viral_helicase1
AAA_30
DEAD
AAA_11
nSTAND3
ResIII
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
AMX01148
UniProt:
A0A143HHC4
LinkDB
All DBs
Position
complement(3222769..3224928)
Genome browser
AA seq
719 aa
AA seq
DB search
MQKLLNESESELEAAQANLRSAMSDLEYLDSSLSYQNILTNTRFFDMAKNQKEGLEAIKQ
KPYFARIHFQKENEPAEKLYIGKTSLFDRDSQEPIIVDWRSPVANVYYDGRLGDLTYMVN
DEELKGHLFSKRQYKIENGKLLDVRDIDLTTNDELLQDALAGKADVRLTEIVSTIQAEQN
EIIRAHLKQPILVQGAAGSGKTTIALHRISYFLYTMGEHFKPQNLMILAPNRLFIDYIAD
VLPELGVGQICQTTFAEYVQKATNIKVKIQNANEQLENAIHSVEEYSWITGMKGTMQYLE
IMDRYIKKLEWQIAEQFEDIYIEKFRMMKASHLRRLFLEDYQYMPIEKRLAKIRSVLQNH
IRQKKKQLIYTLKKRYDDILDRSIFGIRDDAKRKEVVTKWIDERDERLPQVEKEAKTVVS
RYMKRFDKYKIKVLYRTFLTDPVLLQELAPSFTKEMQEQFLKAHEKEAWTLEDLAALYYL
HARIKGVKDEWKMKVVFIDEVQDYSLFQLAALKEGLETDMFTMVGDLAQGIHSYRSLTEW
DPVRELFPRASYKTLQKSYRTTIEIMNVANEVLQQMDEDLPLVEPVVRHGEEPAFHPMDK
WEPKQLAKLYEEIRGNGHRSIALICKTAEDAKKAAKVLSKEGLHIQTLDESSAIDPDALL
IVPSYLSKGLEFDAVIIAAIDEAFYDTALDRKLLYVALTRAMHELHLVAPKKKDLLLKD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagctactaaatgaatcagaaagtgagcttgaagctgcccaagcaaatcttcgc
tctgcaatgtccgatttggaatatctcgattccagtcttagctaccaaaatatattaacc
aacacgaggttctttgatatggcaaagaaccaaaaagaaggactcgaagcgataaaacaa
aaaccctattttgcgcgaattcattttcaaaaggaaaatgagccggcagagaagctatat
atcggtaagacctctctctttgaccgagattcacaagaaccgattattgtagattggcga
tcacctgttgccaatgtttattatgatgggcgtttaggtgaccttacctacatggtaaat
gatgaagaattgaaaggccatctcttttcaaagcgccagtataaaattgaaaatggtaag
ctactggatgtccgcgatattgatctgacaacaaatgatgaactgctacaggatgcgctt
gctggaaaagcagatgtacgcttaacagaaatcgtgtcgaccatccaagcggagcagaat
gaaatcatacgggcacatttaaagcagcctattcttgtccaaggcgcagcgggtagtgga
aaaactacgatagcccttcaccgtatttcttatttcttatatacaatgggcgaacatttt
aaaccacagaatttaatgattttggcgccaaaccgtctatttatagactatatagcggat
gtactgccagagcttggtgtaggacaaatttgtcaaacgacctttgcagagtatgttcaa
aaggccacaaacatcaaggttaaaattcaaaacgctaatgaacagttggagaatgccatc
catagtgtagaggaatacagctggattacagggatgaaaggcacgatgcaatatcttgaa
attatggatcgttatattaagaaacttgaatggcaaatagcagaacaatttgaggatatt
tatatcgaaaaattccgcatgatgaaagcatctcatctacgcagactttttttagaagac
tatcaatatatgcctatagaaaaaagactcgcaaaaattcgttctgttttacaaaaccat
attcgccaaaagaaaaaacagctgatttacacattaaaaaaacgctatgatgatatatta
gatcgttctatctttggcatccgggatgatgcgaaacgaaaagaagttgtcaccaaatgg
atcgatgagcgtgatgagcgactgcctcaggtcgagaaagaagcaaagactgttgtttct
cgttatatgaaacgctttgataaatacaagattaaagtactttaccgtacatttttaaca
gacccagtacttctgcaggaattagctccaagctttacaaaggaaatgcaggagcaattc
ttaaaagcacatgaaaaggaagcttggacattggaagaccttgctgcgctgtactattta
cacgccagaattaaaggcgttaaagatgaatggaaaatgaaagttgtcttcattgacgaa
gtacaggattatagcttgttccagctagctgctttaaaagaaggcttagagactgacatg
tttacaatggtcggtgatcttgcacaaggaattcacagttaccgatctctcacggaatgg
gaccctgtacgcgaacttttccctcgcgcaagctataagacattgcaaaagagctatcga
acaactattgaaattatgaatgttgccaacgaagtgcttcagcaaatggacgaggacctt
cccctcgttgaacctgttgtgcggcatggagaagagcccgctttccatccaatggataaa
tgggagcctaaacaactagcgaaattgtatgaagaaatcagaggtaatggtcatcgctcc
attgcattgatttgcaaaacggcggaggatgccaagaaagcagcgaaggtactttcaaaa
gaaggcctacatattcagacactagatgagtcatcagccatcgacccagatgcgctactt
attgtcccaagttatttatcaaagggactagagttcgatgccgttatcattgctgcgatt
gacgaagccttttatgatacggcacttgatcgtaagcttttatatgtggcacttacacgc
gccatgcatgagttacatttggttgctcctaaaaagaaagatctactattaaaagactaa
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