Rummeliibacillus stabekisii: ATY39_16775
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Entry
ATY39_16775 CDS
T04369
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATY39_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rst03021
]
ATY39_16775
03019 Messenger RNA biogenesis [BR:
rst03019
]
ATY39_16775
Transcription machinery [BR:
rst03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ATY39_16775
Messenger RNA biogenesis [BR:
rst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATY39_16775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AMX00886
UniProt:
A0A143HHC0
LinkDB
All DBs
Position
3326718..3328001
Genome browser
AA seq
427 aa
AA seq
DB search
MTTMTISQLEDMKLKDLYALAREYKISYYGKLTKKELIFAILKSRAESEGYFFMEGVLEI
IQQEGFGFLRPINYSPSSEDIYISASQIRRFSLRNGDKVTGKVRPPKENERYYGLLHVEA
VNGEDPEVAKERVFFPALTPLYPDRHIKLETTPSKLSTRIMDLVAPVGFGQRGLIVAPPK
AGKTLLMKEIANAITEKYPESELIVLLIDERPEEVTDIERSVNADVVSSTFDELPENHVK
VAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALIDTGSRMDEVIYEEFKGTGNLELHLDRSLAERRIFPAIDIR
RSGTRKEELLIPKEQLDKLWAIRKTFSDSPDFAERFLKKLRNTKTNEEFFDTLNTDMKAA
RNGKGLI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaatgacaatttctcaacttgaagatatgaaattaaaagatctctacgcgctt
gctagagaatataaaatttcgtattatggcaagttgacaaaaaaagagctgatttttgca
attttaaaatcccgtgccgaaagtgaaggttatttctttatggaaggcgtgcttgaaatc
atccaacaagaaggatttggtttcttacgccctatcaactattcaccaagctctgaggat
atctatatatctgcatcccaaattcgacgttttagcttaagaaatggcgataaagtaacg
gggaaagttcgtccgccgaaagaaaatgaacgctactacggacttttacatgttgaagct
gtcaatggcgaggatccagaagtggccaaagaacgtgtatttttccctgcgcttacgccg
ttgtatcctgatagacacatcaaattggaaacaacaccgtcaaaactatctactcgtatt
atggatttagtggctccagtcggttttggacaaaggggattaatcgtcgctccaccaaaa
gctggtaagacattgctgatgaaagaaatcgcaaatgccattacggagaaataccctgag
tcagaattaattgtgctattgatagatgaacgaccagaagaagtaacagatattgaacgt
tcagtaaatgcggatgtagtaagttctacattcgatgaactgccagaaaatcatgtgaaa
gtcgcagagcttgttcttgaacgtgctatgcgtcttgttgaacataaacgtgatgtgatt
attttaatggattctatcacaaggcttgctcgcgcctataaccttgttatcccaccaagt
ggtcgtacgttatcaggcggtattgaccctgcggctttccaccgaccaaaacggttcttc
ggtgcagctcggaacattgaagaaggcggcagtttgactattttggctacagctttaatc
gataccggctcgcgtatggatgaagtcatttatgaagaatttaaaggtacagggaattta
gagctacatctagatcgcagccttgctgaacgacgtatcttcccagctattgatatccgc
cgctccggcacgcggaaagaagaacttcttattccaaaagaacagttggataagctgtgg
gcaattcgaaaaaccttctcggactctccagattttgcggagcgtttcttgaaaaaattg
cgtaatacaaagacaaatgaagagttctttgatacgctaaataccgatatgaaagctgca
cgtaatggcaaaggactaatttaa
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