Rhodovulum sulfidophilum: NHU_00199
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Entry
NHU_00199 CDS
T04143
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03030
DNA replication
rsu03430
Mismatch repair
rsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHU_00199
03430 Mismatch repair
NHU_00199
03440 Homologous recombination
NHU_00199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsu03032
]
NHU_00199
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_00199
Enzymes [BR:
rsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHU_00199
DNA replication proteins [BR:
rsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHU_00199
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHU_00199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS_9
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
BAQ67370
UniProt:
A0A0D6AXL2
LinkDB
All DBs
Position
181078..183135
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AA seq
685 aa
AA seq
DB search
MHERLGLRLRFALFFAALALGGMAVLVLGLWFGHARAGGPLDGYVIAGMVAGCGLLGLAA
WIGLLFDANVARPIQALAADLQTRAGVDVAADIDEAPARYLGALAPAANAIHDALAATRD
AQARAVAERTAALNREKAIFEALLRDLAEGVVVATPDHRIMLYNRAALGLLGDLGLDRPL
TAVLRPEPLTHALDRMGARAARGEAEAERFLAATASGERFLMARVSPVAVAGRRAGYVLI
FHDATEDLEAHAELDHLFNTMLEGIRRPTAAIGALFDAIEADPDMGDEMRSAFFARLRGE
QAMLVDRMNQVADRYGTATTRRWPMPAVASDDIFDALTARLPGDLRFEGARQFVRCDGFA
ISELLARVIEGLRGDDRRDGFVLRAVPEGREVCLELHWRGPPVSDGQIDRWLSAPLSAGY
GEYLGRDALEGHGTELWAEPTETGHRLLLPLAAAAAPLLTPADPRPEFYDFSLPPPAAGA
LADRPLGDLSFVVFDTETTGLAPRQGDEIVQIAGVRIVNGRILRGEVFDTLVNPGRHIPA
ASTAVHGIDDAMVRGSPDVIAAGRRFHAFCEGAVLVAHNAAFDMTFLKMKEDRLGLRFDH
PVLCTVLLSAALYPHAEDHTLDALACRFGVRLEAEHRHTALGDAMATAEVFRQMLGMLQV
SGVRTLGEAVARSNEMHGIRRAQSY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcgattggggctgagacttcgctttgcgctgttcttcgcggcgctggctctg
ggcggcatggcggtgctggttctgggcctgtggttcggacatgcccgcgcgggcggtccg
ctcgacggctatgtgatcgcgggcatggtggcaggctgcgggctgctggggcttgcggcc
tggatcgggctgttgttcgacgcgaatgtcgcccggccgatccaggcgctggccgccgat
ctgcagacccgggccggggtcgatgtcgcggccgatatcgacgaggcgcccgcgcgctat
ctgggcgcgctcgcgcctgccgccaatgcgatccacgatgcgctggccgccacccgcgac
gcccaggcccgcgccgtggccgagcgcaccgccgcgctgaaccgcgagaaggcgatcttc
gaggcgctgctgcgcgatctggccgagggcgtggtggtggccacgcccgaccaccggatc
atgctgtataaccgcgccgcgctcgggctgctgggcgatctggggctcgaccggccgctg
accgccgttctccggcccgagccgctgacccatgcgctcgaccggatgggggcgcgggcc
gcccgtggcgaggccgaggcggaacgcttcctggccgctaccgccagcggcgagcgtttc
ctgatggcgcgggtcagtccggtcgcggtcgcgggccggcgcgcgggctatgtgctgatc
ttccatgacgcgaccgaggatctcgaggcgcatgccgagctcgaccatctgttcaacacc
atgctcgaggggataaggcggccgaccgccgccatcggggcgctgttcgatgccatcgaa
gccgatcccgacatgggcgacgagatgcgctcggccttcttcgcccggcttcgcggcgaa
caggcgatgctggtcgaccggatgaaccaggtcgccgaccgctacggcaccgccaccacc
cggcgctggccgatgcccgccgtcgcctccgacgacatcttcgatgcgctgaccgcgcgg
ctgcccggcgatctgcgtttcgagggcgcgcgccagttcgtccgctgcgacggtttcgcg
atttccgagctgttggcccgggtgatcgaggggctgcgcggcgatgacaggcgcgacggt
ttcgtcctgcgcgcggtgcccgagggtcgcgaggtctgtcttgaactgcactggcgcggc
ccgccggtcagcgacgggcagatcgaccgctggctttcggcgccgctttccgcgggttat
ggcgaatatctcggccgcgacgcgctggaaggccatggcaccgagctttgggccgagccg
accgagaccggccaccgtctgttgctgccgctggccgccgccgccgcgccgctgctgacg
ccggccgatccgcgtccggaattctacgacttctcgttgccgccgcccgccgcgggcgcg
ctggccgaccggcctctcggcgacctgagcttcgtcgtcttcgacaccgagaccaccggg
ctcgcgccgcgccagggcgacgagatcgtgcagatcgccggggtgcgcatcgtcaacggc
cggatcctgcgcggcgaggtcttcgacaccctggtcaatccggggcggcatattccggcg
gcctcgaccgcggtccatggcatcgatgacgcgatggtgcgcggcagtccggacgtgatc
gcggcgggacggcggtttcacgccttctgcgagggcgcggtgctggtcgcccataacgcc
gccttcgacatgaccttcctgaagatgaaggaagaccggctggggcttcgcttcgaccat
ccggtgctgtgcaccgtgctgctttcggccgcgctttacccgcatgccgaggatcacacc
ctcgacgcgctggcctgccgcttcggggtgcggctcgaggccgagcatcgccataccgcg
ctgggcgatgcgatggcgacggccgaggtgttccggcagatgctgggaatgttgcaggtg
tcgggggtgcggacgctgggcgaagcggtggcgcggtccaacgagatgcatggcatccgc
cgcgcccagagctactga
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