Rhodovulum sulfidophilum: NHU_00601
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Entry
NHU_00601 CDS
T04143
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03420
Nucleotide excision repair
rsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHU_00601
03430 Mismatch repair
NHU_00601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_00601
Enzymes [BR:
rsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHU_00601
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHU_00601
MMR (mismatch excision repair)
Other MMR factors
NHU_00601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
UvrD_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAQ67770
UniProt:
A0A0D6AYS7
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All DBs
Position
complement(608847..610757)
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AA seq
636 aa
AA seq
DB search
MAQGVKNVMEPEVSEIMGNIASKHDFLLSGGAGSGKTYSLVRTIEEVCGVYPGSPIACMT
YTNATAREILERIAAPNLKVGTIHDFLWDIIKPFQESIKEALITLHNDVEFGGVKFSGSK
VSLSDFSEKNIQYKEFYSARRGVISHDELLHISEFLFSRYPKLCSVAKARYPFIFIDEYQ
DTAPEVVGILLDHFQNSAVESVIGFFGDSMQSIYDGSVGSLTDYVASGRICEVVKTENRR
CPSAVIDVANKIRKDNFVRAPSNDPKAPNMENGVVIKGSAKFMYTQGVQDEAFSINDFLG
WDFSDIRNCRELNLTHNLIAPRAGFSGLLDIYDKDRVLSYRDRIKSYIKDNAVTTDFSEM
TFGQVVDELYSAEGNKKKIDPTKKQREFIDSNIDLFEFAKGLPFLEFSRSYVSKDQLLDD
KKEHEGEEGKTNTSRDALIKHLFKIKKIVRLYNNGEVSRFLRLTDIKINRLQDKVDIEEN
IAKLGKMGGSSIGEVLSFRDKSGIVRIDDNLKFFQENNRYLYHRVQAAPYAWFLSLFEYL
EGRSPFSTQHKVKGRQFERVLVVLDNGDWSLYNFENLLSGDGKDTVIARTEKIFYVCCTR
AMKDLVVFIKDPSESAISGAKQIFGEEHVINVGTPA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctcagggggtgaaaaacgtcatggagccagaagtttctgagatcatgggtaatatc
gcttcgaaacatgacttcctgctgagcgggggagccggaagcggaaagacctattctctc
gtgcgtactattgaagaggtctgcggtgtctatcccggcagtcccatcgcgtgtatgact
tatacaaatgcgactgcaagagagatacttgagagaattgctgcgccaaaccttaaggtc
ggaacaatacatgacttcctatgggatataatcaagccattccaggagagcattaaagaa
gcgctgatcaccttgcataatgatgtggagtttggcggggtgaagttttccggatctaag
gtcagtttatcagacttttcggagaaaaatattcaatacaaggaattctactctgcgcga
aggggagtgatctcacacgatgagctgctgcatatttcggagtttctgttctcaagatac
cctaagctttgctctgtcgcaaaggccagatatccattcatattcatagatgaatatcag
gatactgcgccagaagtcgtagggattctgctagatcactttcagaattcagcggtcgaa
agtgttattggatttttcggtgattcgatgcagtcaatatacgacggttcggtagggagt
ttaaccgactatgtcgcttcaggacgtatttgtgaggttgtaaagacagagaacaggcga
tgtccttcggcggtgatcgatgtggccaacaagatcagaaaagacaatttcgttcgggct
ccttctaacgaccctaaagcgccgaatatggaaaatggcgtcgtaatcaagggtagtgca
aagtttatgtacacccaaggcgttcaggacgaggctttttcaataaatgattttcttggg
tgggacttctcagatattcgaaactgtcgcgaacttaacctcacccataatctaatagct
cctcgcgctggattttccggacttttggatatctatgataaggatagagttcttagttac
agggatcgcatcaagtcttacatcaaggataacgctgtcacgactgatttctcagaaatg
acgtttgggcaagtggttgatgaattgtacagtgcagagggaaacaagaaaaaaattgac
cccacaaaaaagcaaagagagtttatcgatagcaatattgatctgttcgagtttgccaag
gggctaccattcttggagttttcccgcagttatgttagcaaggatcaattgcttgatgac
aagaaggagcatgaaggtgaggagggtaaaacaaatacttctcgcgacgccttaataaaa
cacctcttcaagataaagaaaatagttcgcctgtataataatggagaggtttcgcgcttt
ctcagattgaccgacattaaaataaatcgcttgcaagataaagtggatattgaagaaaat
atcgcaaaactcggaaaaatgggcggcagtagtattggtgaagttctgagttttcgcgat
aaatctggcattgtcaggattgatgacaatctaaagtttttccaggaaaataaccgctat
ctgtatcatagagtacaagcggcaccttacgcgtggtttctgtctctatttgaatactta
gagggccgcagcccattctcaacgcaacataaggtaaaaggccgccagtttgaacgtgtg
cttgtcgttctggataatggtgattggtctctctacaattttgagaacctcctttcgggt
gatggtaaggataccgttatagctcgaacagagaaaatattctacgtctgctgcactaga
gccatgaaggacttggtggtatttattaaagaccctagtgaatcagcaatatccggagcg
aaacagatatttggtgaagaacatgtgatcaatgtcgggactccggcgtga
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