Rhodovulum sulfidophilum: NHU_00793
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Entry
NHU_00793 CDS
T04143
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03030
DNA replication
rsu03430
Mismatch repair
rsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHU_00793 (dnaE)
03430 Mismatch repair
NHU_00793 (dnaE)
03440 Homologous recombination
NHU_00793 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsu03032
]
NHU_00793 (dnaE)
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_00793 (dnaE)
Enzymes [BR:
rsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHU_00793 (dnaE)
DNA replication proteins [BR:
rsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHU_00793 (dnaE)
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHU_00793 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Scaffold
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
BAQ67961
UniProt:
A0A0D6AYX8
LinkDB
All DBs
Position
792183..795683
Genome browser
AA seq
1166 aa
AA seq
DB search
MSAPRFIHLRLHTEYSLLEGAVRVKKLPGLCAAAGMPAVAVTDTNNMFCALEFSSYATGA
GIQPILGCQVDLTYDPAAPGERPRAPAPVVLLAQNEAGYGNLMKLNSCLYLGETGELPQV
SPDELIAHADGLICLTGGPDGPVGRLIRDGQRAKAEALVTRLAAAFPTRLYVELQRHPGE
GGQPTEAERETERAHVEMAYAMDLPLVATNDVYFPKSDMYEAHDALLCIADGAYVDQAEP
RRRLTPQHYFKTPEEMAALFADLPEALENTVEIARRCAVKSEKRKPILPRFADDEVEELR
RQAWEGLEARLAVIPHAAPVEDYEKRLKFELGIIEGMGFPGYFLIVADFIKWGKEHGIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIHYV
QKKYGREKVAQIITFGALLSKAAVRDVGRVLQMPYGQVDKLSKLIPVEGVKPVSISQALT
DEPRLREAAKNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDDLVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVVRNAIDLILKSGRPLHQAADGTVLYEPAAGAE
NDIGHIPLDDPQTYELYSTAHTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKQGLKPLESIHPTIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFVEGAKKNGVDAKKAAEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYAEEVRRGLDLEIVAPCVNRSFPTFDVQEGC
LVYALGALKNVGIEAMKLIVSARGDRPFDSLFDFARRVDMKHVGKRPLEMLARAGAFDAL
DGNRRRVFESLDALVGYSAAIHDQRASAQVSLFGEAGEDLPEPRPAQVPDWLPNERLAEE
QKAIGFYLSGHPLDDYMPALRRKKVMTKAEVEEKTKAGPAVLRMAGAVAARQERKSAKGN
RFAFVQMSDPTGLFEVTLFSDVLEVARDQLEPGMNVVVQVEANLENDQLKLLGRSVQPVD
TVVADAGVIGLKVVVETEAAVEAVATLLDRARGESGARGRGPIEFSLVAPDLPGEVRMTL
NDRYPVNPQIKGALRSLPGVAMVEEV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccccgattcatccatcttcgcctgcataccgaatactcgctgcttgaaggc
gcggttcgggtcaagaaactgccgggtctctgtgcggccgcgggaatgcccgcggttgcc
gtcaccgacaccaacaacatgttctgtgcgctggaattttccagctatgccacgggggcg
gggatccagccgatcctgggctgtcaggtcgatctgacctacgatccggcggcccccggc
gagcgcccgcgcgcgcctgcgcctgtggtcctgctggcgcagaacgaggccggttacggc
aatctgatgaagctgaattcctgcctctatctgggcgagacgggcgagttgccgcaagtc
tccccggacgaactgatcgcgcatgccgacgggttgatctgcctgaccggggggccggac
ggccccgtcggacgactgatccgcgacggccagcgcgcgaaggccgaggcgctggtgacc
cggctggcggcggcctttccgacccggctttatgtcgagctgcagcgccatccgggcgag
ggcggccagccgaccgaggccgagcgcgagaccgagcgcgctcatgtcgagatggcctat
gccatggacctgccgctggtcgcgaccaatgacgtctatttccccaaatccgacatgtac
gaggcccatgacgcgcttctgtgcatcgccgacggggcttatgtggaccaggccgagccg
cgccgccgcctgacgccgcagcattatttcaagacccccgaagagatggcggcgctgttc
gccgacctgcccgaggcgctggagaacaccgtcgagatcgcccgccgctgcgcggtgaaa
tcggaaaagcgcaaaccgatcctgccgcgctttgccgatgacgaggtcgaggaattgcgc
cgccaggcctgggaggggctcgaggcgcggctggcggtcattccccatgccgcgccggtc
gaggattacgagaaacggctgaaattcgagctcgggatcatcgaggggatgggcttcccg
ggctatttcctgatcgtggccgacttcatcaaatggggcaaggaacacggcattccggtg
gggccgggacggggctcgggcgcgggctctctggtggcctatgcgctgaccatcaccgat
ctcgaccccctgcgctattcgctgctgttcgagcgcttcctgaaccccgaacgggtctcg
atgcccgacttcgacatcgacttctgcatggatcgccgcgaggaggtcatccattacgtg
cagaagaaatacggccgcgagaaggtggcccagatcatcaccttcggcgcgcttctgtcc
aaggccgcggtccgcgacgtgggccgggtgctgcagatgccctatggccaggtcgacaag
ctgtcgaagctgatcccggtcgagggcgtcaagccggtctcgatctcgcaggcgctgacc
gacgagccgcggctgcgcgaggcggcgaagaacgaagaggtcgtggaccggctgctgacc
tatggccagcaggtcgaggggcttttacggaacgcctcgacccacgcggcgggggtggtg
atcggcgaccggccgctcgacgatctggtgccgctctatcaggacccgcgctcggacatg
cccgcgacccagttcaacatgaaatgggtggagcaggccggtctggtgaagttcgacttc
ctcgggctgaagacgctgaccgtggtccggaacgccatcgacctgatcctgaaaagcggc
cgaccgctgcatcaggcggccgatggcacggtcctttacgaaccggcggccggggccgag
aacgacatcgggcatattccgctggatgacccgcagacctacgagctttactcgacggcc
catacggtcgcggtgttccaggtggaaagctcgggcatgatggatgcgctcaggcgcatg
aagccgacctgcatcgaggatatcgtggcgctggtggcgctgtaccgtcccggcccgatg
gagaacattcccacctattgcgaggtgaagcaggggctcaagccgcttgaatcgatccac
cccaccatcgaccatatcctggccgagacccagggcatcatcgtctatcaggaacaggtg
atgcagatcgcccaggtgatggcgggctacagcctgggcggcgccgaccttctgcgccgc
gccatgggcaagaagatcaaggaggcaatggatgccgagcggccgaaattcgtcgagggg
gccaagaagaacggcgtcgatgccaagaaggcggccgaggtcttcgacctcctggaaaaa
ttcgccaattacggcttcaacaagtcccacgccgcagcctatgcggtggtcagctaccag
accgcctggctgaaggccaaccacccggtcgagttcatggcgggcgtcatgaactgcgat
atccacctgaccgacaagctggcggtctatgccgaggaggttcgccgcgggctcgacctc
gagatcgtcgcgccttgcgtgaaccgctccttccccacattcgacgtgcaggagggctgc
ctcgtctatgcgctgggcgcgctcaagaatgtggggatcgaggcgatgaaactgatcgtc
tcggcgcgcggcgaccggcccttcgactcactcttcgatttcgcccgccgggtcgacatg
aagcatgtcggcaagcgtccgctggaaatgctggcccgtgccggggcgttcgacgcgctc
gatggcaaccgccgccgggtcttcgaaagcctcgacgcgctggtgggctattccgccgcg
atccacgaccagcgtgcctcggcgcaggtctcgctgttcggcgaggcgggcgaggacctg
cccgagccgcgcccggcgcaggtcccggactggcttccgaacgaacgtctggccgaagag
cagaaggccatcggcttttacctgtcggggcatccgctcgacgattacatgcccgcgctc
aggcgcaagaaggtgatgaccaaggccgaggtcgaggaaaagaccaaggcggggccggcc
gtgcttcgtatggcgggcgccgtcgccgcgcggcaggaacgcaagtcggccaagggcaac
cgcttcgccttcgtgcagatgtcggacccgaccgggctgttcgaggtcacgctgttctcg
gatgtgctcgaggtggcgcgcgatcagctcgagccgggcatgaatgtggtggtccaggtc
gaggccaatctggaaaacgaccagctgaaactcctggggcggtcggtgcagccggtcgat
acggtcgtggctgatgccggggtgatcgggctcaaggtggtggtcgagaccgaggccgcg
gtcgaggcggttgcaaccctgctcgaccgggcgcggggcgaaagcggggcgcgcggtcgc
ggcccgatcgaattcagcctggtggcccccgaccttcccggcgaggtgcggatgacgctg
aacgaccgctacccggtcaatccccagatcaagggcgcgctgcgcagcctgcccggcgtc
gccatggtcgaagaggtctga
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