KEGG   Rhodovulum sulfidophilum: NHU_00817
Entry
NHU_00817         CDS       T04143                                 
Symbol
helD
Name
(GenBank) helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
rsu  Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsu03400]
    NHU_00817 (helD)
Enzymes [BR:rsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NHU_00817 (helD)
DNA repair and recombination proteins [BR:rsu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NHU_00817 (helD)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C zf-C4_Topoisom UvrD_C_2 AAA_30 Helicase_IV_N Viral_helicase1 AAA_12 Phage_endo_I
Other DBs
NCBI-ProteinID: BAQ67985
UniProt: A0A0D6AZB4
LinkDB
Position
complement(825644..828688)
AA seq 1014 aa
MTYSIPGDKYSEPVNATWTRRLPPWGTSGMSETEPDHWISMKLVSRPLPAFLSDPFRKHP
RALALQDNTIAASGGAHARIHLSEIAASPVVQRGRVSARLTLDLGNQSSVLLPGVQEAAA
RAFAQAVETAWSGYNLSQLSKEDDAIAALMMAIEGLKAPANYPAACLVDPVASQAADLDA
RVLKKLNPAAIGEETMARLAPIMELARNPEQLRDAAIAAFVDQQLAEWKEFFDTVESMPL
TPEQRLSVVVDEDATLVLAGAGSGKTSVITAKAAYLVKAGIRQPHELLLLAFAKDAATEM
SERIEARCGVPIIARTFHALAYEIIGTVEGEKPPLAPTATDDKAFLQLIKDILRDIVSRM
ADIAGTVVGWFAGFFDDIPNAWDYDSAHKWYSEVESRNLRSLKGDTVASFEELMIANWLY
LNGIAYEYEPTYEHKLTGTGRRAYTPDFRLTESGVYLEHFGVRKTTRKDGTEELTTAPFI
DRDTYLEGMAWKRQVHAEHETTLIETYSWENEEGRLLEALAEKVAPHVTLRPRPALEIYD
SVTSLGVVDGFTSLIATFLRHFKNGSYHLGDCETKAATLKMGKRSQAFLKIFGAVYREYQ
DRLGDRIDFEDMVNRATALVESGRYDSPFRHILVDEFQDISTGRARLIQALKNQHPETRI
FAVGDDWQSIYRFAGSDIHIMRNFGREFGGVFAGREGVHRTVDLGRTFRSVDKIALAARR
FVLCNPAQITKTVVPAGEAEHPAIRIAWTRRETGEQVLDDTLKALTAEPAPPGRKATALL
LGRYRFIEPDMRGLRRRHQHLTITFKTIHASKGLEADHVVLLGADRARMGFPSMIVDDPL
LALVSPEAEPFAKAEERRVMYVAMTRARRTVTILASEARPSAFVTELLKDPAYDVASPRE
AQERTHTCGQCGGRLLFMPGSDGPGWYRCEHIKHCGNRMPACPACGTGLPVRKEPKDEKI
CRDCGAVQAPCPECTDGWLVERRGRYGAFLGCVRFPDCAGKSKKERRARQRTGG
NT seq 3045 nt   +upstreamnt  +downstreamnt
gtgacgtacagcattccaggcgacaagtactcggaaccagtgaatgccacctggacgcga
aggcttcccccctggggtacgtctggtatgtcggaaaccgaacccgaccactggatttcg
atgaaactcgtatcgcgcccactgcccgctttcctgtccgaccccttccgcaagcacccg
cgagcgctggcactccaggacaacacgattgcggcctctggcggcgcgcatgccaggatc
cacctctcggagatcgcggcaagtcccgtggtgcagcgtggtcgtgtctccgctcgcctc
accctggatctcggcaaccagtcctccgtcctgctgcccggggtccaggaggcagccgcc
agagccttcgcgcaagctgtcgagacagcctggtccggctacaatctttcccaactttcc
aaggaagacgacgcgattgcggccctgatgatggcgattgagggattgaaggcaccggcg
aactatcccgccgcctgcctggtagacccggtcgcaagccaggccgccgacctcgacgcc
cgcgttctgaagaagctcaatccagcagccataggtgaggaaacgatggcgcggctggct
ccgatcatggagctcgcgcgcaatccagagcaactccgcgatgcggcgatcgctgctttc
gtcgaccagcagctggcggagtggaaagagttcttcgataccgtcgagtctatgccactg
acgccggagcagcggctgtcggtcgtggtcgacgaggatgcgacgctggttctcgccggc
gcaggttcgggcaagacctcggtcatcaccgccaaggctgcctatctggtgaaggccggt
atccggcagccgcatgagcttctgcttctggccttcgccaaggatgccgccaccgagatg
tccgagcgcatcgaggcgcggtgcggcgtgccgatcatcgcgcgcaccttccacgctctg
gcctatgagatcatcggcacagtcgagggtgagaagccgcccctcgcaccgacggcgacc
gatgacaaggccttcctccaactgatcaaggacatcctgcgcgacatcgtgagccggatg
gccgacatcgctggaaccgtggtgggttggttcgccggcttcttcgacgatatccccaat
gcatgggactacgactccgcccacaagtggtattccgaggttgaaagccggaacctgcga
agcctgaagggcgacactgtcgccagcttcgaggagctgatgatcgccaactggctgtac
ctgaacggtatcgcctacgaatacgagccgacctacgagcacaagctgaccgggaccggc
aggcgcgcctataccccggacttccggctcacggagagcggcgtctatctcgagcatttc
ggcgtccgcaagacgacgcggaaggacggtacggaggagctgacgaccgcccccttcatc
gaccgcgacacctacctggagggcatggcgtggaaacgccaggtccatgccgaacacgaa
acaaccctaatcgaaacctatagctgggagaacgaggaaggccgcctgctcgaggcgctg
gcagagaaggttgcaccgcatgtcacgctccgcccgcgcccggccctcgagatctacgac
agcgtgacgtcccttggtgtcgtcgacggcttcacctcactgatcgcgaccttcctgcgg
cacttcaagaacggcagctatcacctgggcgattgcgagacgaaggccgcgaccctgaag
atgggcaagcgcagccaggcctttctcaagatcttcggggcggtgtaccgcgaataccag
gacaggctgggcgaccgcatcgatttcgaggacatggtgaaccgcgcgaccgcgctggta
gaaagcgggcgctacgacagcccattccgccatatccttgtcgacgaattccaggacatc
tcgaccggccgggcgcggctgatccaggcgctcaagaaccagcatccggagacgaggata
tttgccgtcggcgacgactggcagtcgatctaccggtttgccggctccgacatccacatc
atgcgcaacttcggtcgcgagttcggcggcgtattcgctgggcgcgaaggtgtccaccgc
actgtcgacctcggacggacgttccggtcggtcgacaagatcgccctggctgcgcggcgc
ttcgtgctgtgcaacccggcgcagatcaccaagacggttgttcccgccggcgaggcagag
catcccgcgatccgcattgcatggacccggcgcgagaccggcgaacaggtgctggacgac
accctgaaagctctgacggcagagcctgcgcctcccggtcgcaaggcgactgcgctcttg
ctgggccgttaccgctttatcgagcccgacatgcgcggcctccggcgacggcatcagcac
ctgacgatcaccttcaagaccatccatgcctcaaagggcctggaggccgaccacgttgtc
ctgctcggcgccgatcgcgcacgcatgggctttccatcgatgatcgtcgacgacccgctt
ctcgccctcgtctcgcccgaagcggaacctttcgccaaagccgaagagcgccgcgtgatg
tatgtcgccatgactcgggcacgacgaacggtcacgatcctggcgtccgaggcccgccct
tcagccttcgtcacggagctgttgaaagatcccgcctatgacgtagccagcccacgcgag
gcccaggagcgcacccatacatgcgggcaatgtggtggccgcctgctgttcatgccaggc
agcgatggcccaggctggtatcgttgcgagcacataaagcactgcggcaaccgcatgccc
gcctgtcccgcttgcggcaccgggctaccggttcgcaaggaaccgaaagacgaaaagatt
tgccgagactgcggagccgtccaggcgccatgtccggaatgcaccgacggctggctcgtg
gaacggaggggaagatacggggctttcctgggctgcgtccgtttccctgattgcgcagga
aagtcgaagaaggaacggcgagcacgacagcggacaggtggctga

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