KEGG   Rhodovulum sulfidophilum: NHU_01161
Entry
NHU_01161         CDS       T04143                                 
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
rsu  Rhodovulum sulfidophilum
Pathway
rsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NHU_01161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsu03019]
    NHU_01161
Enzymes [BR:rsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NHU_01161
Messenger RNA biogenesis [BR:rsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NHU_01161
SSDB
Motif
Pfam: DEAD Helicase_C ResIII HEM4 AAA_19 NAT10_TcmA_helicase P-loop_SecA Utp25_C
Other DBs
NCBI-ProteinID: BAQ68323
UniProt: A0A0D6AZJ7
LinkDB
Position
1211312..1212517
AA seq 401 aa
MTFTELGLNARMVSRLGALGLTKPTPIQEKAIPQALQGHDILGIAQTGTGKTAAFGIPLI
VALSKQQERPAPHSARGLVLAPTRELAGQIVQSLQGMTADLRITLVVGGKSINVQAEKLA
RGTDILVATPGRLIDLMDRRAIDLGRTRFLVLDEADQMLDIGFIHALRRIAPKLSKDRQT
MMFSATMPKAMADLSRQYLDKPVRVEASAPGKVADKVSHSVHFVAKERKQDLLIELLRGH
RDDRALVFSRTKHGAERLMKHLEKAGFAATSIHGNKSQGQRDRAIAAFKAGSVRVLVATD
VAARGIDIPDVGHVYNYDLPNVPENYVHRIGRTARAGHSGRAIAFCAADEVAELRAIEKV
LGTRVEIAGGRPWEAMKAAPKSPQKRRTRQRSAGRSARLAA
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgacgttcaccgaactcgggctcaatgcccgcatggtctcgcggctcggcgcgctgggg
ctgaccaaaccgacccccattcaggaaaaggccatcccgcaggcgctgcagggccacgac
atcctggggatcgcccagaccgggaccggcaagaccgccgccttcggcatcccgctgatc
gtggcgctgtcgaaacagcaggagcgtcccgcgccgcattcggcccgcgggttggtgctt
gcgcccacgcgggaactggcgggccagatcgttcagagccttcagggcatgacggccgat
ctgcgcatcacgcttgtcgtcggcggcaagtcgatcaacgtgcaggcagagaagcttgcg
cgcggcaccgatatcctcgtcgcgacgccgggccggttgatcgacctgatggatcgccgg
gccatcgatcttggccggacacggtttctggttctcgacgaggccgaccagatgctcgat
atcggcttcatccatgcgctgcgccgcatcgcgccgaagctgagcaaggacaggcagacc
atgatgttctcggccacgatgccgaaggcgatggcggatctgtcccggcagtatctggac
aagcccgtccgtgtcgaggcctcggcgcccggcaaggtcgcggacaaggtcagccattcg
gtgcatttcgtcgccaaggagcggaagcaggatctgctgatcgaattgctgcgcgggcat
cgcgacgaccgggctctggtcttttcgcgcaccaagcatggtgccgaacggttgatgaag
catctcgagaaggccggtttcgcggcgacctcgatccacggcaacaagagccaggggcaa
cgggaccgggccattgcggccttcaaggcgggatcggtgcgtgtgctggtcgcgacggat
gttgcggcccgcgggatcgacatcccggatgtgggacatgtctacaattacgacctgccg
aacgtgcccgagaactacgtgcaccggatcgggcggacggcccgggccggccatagcggc
cgcgcgattgccttctgcgctgctgatgaagtggcggaactcagggccatcgagaaggtg
cttggcacccgtgtcgagattgccgggggccgtccctgggaggcgatgaaggctgcgccg
aaatctccgcagaaacgccggacgcgtcagcgctcggcgggccgttcggctcgactcgcc
gcgtga

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