Rhodovulum sulfidophilum: NHU_01189
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Entry
NHU_01189 CDS
T04143
Name
(GenBank) UvrD/REP helicase domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03420
Nucleotide excision repair
rsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NHU_01189
03430 Mismatch repair
NHU_01189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_01189
Enzymes [BR:
rsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHU_01189
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NHU_01189
MMR (mismatch excision repair)
Other MMR factors
NHU_01189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAQ68349
UniProt:
A0A0D6B0W9
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Position
1240528..1242990
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AA seq
820 aa
AA seq
DB search
MCPIDDSDAFETAAEAPLSVRASVGAMAARSAPYLDGLNPSQRQAVETLDGPVLMLAGAG
TGKTRALTARIAHLLFTGAARPNEILAVTFTNKAAREMKERVGRIMGETVEGMPWLGTFH
AICVRLLRRHAELVGLKSNFTILDTDDQIRLLKQLIASANIDEKRWPARQLAGLIDHWKN
RAWTPEAVPASEASGFDGRGVKLYAAYQERLKTLNAADFGDLLLHVVTIFQAHPDLLEQY
RRWFRYILVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKD
FPGAAVIRLEQNYRSTPHILAAASHLIAANKGRLGKTLWTEAEGGEQVRLIGHWDGEEEA
RWIGEEAEALQGGSRGMRPFSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYER
MEIRDAMAYFRLAVSPADDLAFERIVNTPKRGLGDKAQQKIQATARAEGVPLVEGARLLL
EAGGLGGKGGAALRKLIEAIWRWHDDVRAAAPSVVPDEAALIDDEAVPLETGRGAPTHVE
LAERILDDSGYTAMWQADKTPEAPGRLENLKELVKALEEFDNLQGFLEHVALIMDNESEA
SGAKISVMTLHAAKGLEFPVVFLPGWEDGLFPSQRAMDETGLKGLEEERRLAYVGLTRAE
ELCTVSFAANRRVYGKWQSQLPSRFIDELPPSHVDVLTPPGLYGGGYGAAAPQAAVSGIE
ARASRADVYNSPGWQRLQSRNAGRSPAAPSRGARGGGVVIDAEALPVFELGARVFHQKFG
YGTVTGIEGDKLDIAFDKAGAKKVVARFVVAAASADDVPF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgatcgacgactccgatgctttcgaaaccgccgcagaggcgcctctttccgtt
cgcgcctccgttggtgccatggcggcgcgatcggcgccttatctcgacggactgaacccg
tctcagcgccaggcggtcgagacgctggacggcccggtcctgatgctggcgggggcgggc
accggcaagacccgggcgctgacggcgcggatcgcgcatctgctgttcaccggcgcggcc
cggccgaacgagatcctggcggtgaccttcaccaacaaggccgcgcgcgagatgaaggag
cgggtcggccggatcatgggcgagaccgtcgagggcatgccctggctcggcaccttccat
gcgatctgcgtcaggctgttgcgccgccatgccgagctggtggggctcaagtcgaatttc
accatcctcgataccgacgaccagatccggctgctgaagcagttgatcgcgagcgcgaat
atcgacgagaagcgctggcccgcgcgccagctggccggattgatcgaccactggaagaac
cgcgcctggacgcccgaggctgtgccggcctcggaggcctcgggtttcgacggccggggc
gtgaagctttacgccgcctatcaggaacggctgaagaccctgaacgcggccgatttcggc
gatctgctgctgcatgtggtgacgatcttccaggcccatcccgatctgctcgagcagtac
cggcgctggttccgctatatccttgtagacgaatatcaggacaccaatgtcgcccagtat
ctgtggctgcggcttctggcgggcgggcacaagaacatctgctgtgtcggcgacgacgat
cagtcgatctatggctggcgcggtgccgaggtgggcaacatcctgcgcttcgaaaaggat
tttcccggcgccgcggtgatccggctggaacagaattaccgctcgaccccgcatatcctc
gccgcggcctcccatctgatcgcggccaataaggggcggcttggcaagacgctctggacc
gaggccgagggcggcgagcaggtccggctgatcggtcattgggatggcgaggaagaggcc
cgctggatcggcgaggaggccgaggcgctgcagggcggcagccgcgggatgcggcccttc
tcgctggacgacatggcgattctcgtgcgcgccagccaccagatgcgtgccttcgaggac
cgcttcctgaccatcggtctgccctatcgggtgatcggcggaccgcgcttctacgagcgg
atggagatccgcgatgcgatggcctattttcgcctcgccgtcagccccgccgacgatctt
gccttcgagcggatcgtgaacacccccaagcggggcctcggcgacaaggcgcagcagaag
atccaggccacggcgcgggccgagggcgtgccgctggtcgagggcgcccggctgctgctg
gaagcgggcgggctcggcggcaagggcggggccgcgctgcgcaagcttatcgaggcgatc
tggcgctggcatgacgatgtgcgggccgcggccccctcggtcgttccggacgaggccgcg
ctgatcgatgacgaggctgtgccgctggagaccgggcggggggctccgacccatgttgag
ctggccgagcgcattctcgacgactcgggctacacggcgatgtggcaggccgacaagacg
cccgaggcgccgggccgactggaaaacctcaaggaactggtcaaggcgctggaggaattc
gacaacctgcagggctttctcgaacatgtcgcgctgatcatggataatgaaagcgaggcg
tccggggccaagatctcggtgatgacgctgcatgccgccaaggggctggaatttccggtg
gtgttcctgccgggctgggaggacgggctgttccccagccagcgggcgatggacgagacc
gggctgaaggggctcgaggaggaacggcggctggcctatgtcgggctgacccgggccgaa
gagctttgcaccgtgtccttcgccgccaatcgccgggtctacgggaaatggcagtcgcaa
ttgccctcgcgcttcatcgacgagctgccgccttcccatgtcgacgtgctgacgcccccc
gggctttacggtggcggctatggcgcggccgcgcctcaggcggcggtctcgggcatcgag
gcacgggcctcgcgcgccgatgtctacaattcgccgggctggcagcggctgcagagccgc
aatgccggccggtcgcccgccgccccttcgcgcggtgcgcgcggcggcggtgtcgtgatc
gatgccgaggcgctgccggtcttcgagcttggcgcgcgggtgttccaccagaaattcggc
tatggcacggtgaccggtatcgagggcgacaagctcgacatcgccttcgacaaggccggg
gcgaagaaggtcgtggcccggttcgtggtggcggccgccagtgccgatgacgttcccttc
tag
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