Rhodovulum sulfidophilum: NHU_02559
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Entry
NHU_02559 CDS
T04143
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsu
Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_02559 (phrB)
Enzymes [BR:
rsu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NHU_02559 (phrB)
DNA repair and recombination proteins [BR:
rsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NHU_02559 (phrB)
Prokaryotic type
NHU_02559 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAQ69708
UniProt:
A0A0D6B3J9
LinkDB
All DBs
Position
complement(2675902..2677305)
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AA seq
467 aa
AA seq
DB search
MIWWVRRDLRLGDNAALAAAAGSGRPVVPLFIHDETVEALGVAAKWRLGEGVAAFSRALG
ARGSRLILRRGAALGVLRAVAAETGAAAIVRSRAYDPAGLTRDKAVEDGLDGTGIELRAV
AGSLLFEPWMVETGQGGFYKVYTPYWKAVRDRDLPEPAPAPGLIPRPDFWPASDEIEDWR
MGAALGRGAAVLARHASVGEEAAQGRLGAFAAQKIADYAERRDFPAAGATSRLSEHLSWG
EISPRSCWHAGLRAMEAGKAGAETFLKELVWREFAWHLLWHSPHIAERNWREGWDDFPWS
TDGDSPEATAWKRGRTGIPFVDAAMREMHVTGTMHNRARMVAASWLTKNLMTHWRVGMDW
FADHLTDWDPASNAMGWQWVAGSGPDAAPYFRIFNPETQAAKFDPDGAYRDAWIAEGRQS
PGPGALDYFDAVPRAWGLSPDAAYPAPAVTPEAGRRRALAAYQAREG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgatctggtgggtccgtcgcgacctgcgcctcggcgacaacgccgcgcttgccgcggcg
gcggggtcggggcggccggtggtgccgctcttcatccatgacgaaaccgtcgaggcgctt
ggcgtagcggcgaaatggcggctgggcgagggcgttgcggctttctcccgggctctgggc
gcgcgcggctcgcggctgatcctgcgccggggcgccgcgctgggtgtgctacgcgcggtg
gcggccgagaccggtgccgccgcgatcgtccggagccgcgcctatgacccggccgggctg
acccgcgacaaggcggtcgaggacgggcttgacgggaccgggatagagctgcgcgcggtt
gccgggtctctgctgttcgagccctggatggtcgaaaccgggcagggcggtttctacaag
gtctatacgccctactggaaggcggtgcgcgaccgcgacctgcccgagcccgcgcccgcg
ccggggctgatcccgcgccccgatttctggcccgcctccgacgagatcgaggactggcgg
atgggggcggcgcttggccggggggcggccgtgctggcgcgtcatgcctcggtcggcgag
gaggcggcacaggggcggctgggcgccttcgcggcgcagaagatcgccgattacgccgag
cggcgcgatttcccggcggccggggccacctcgcgcctgtccgagcatctgagctggggc
gagatttccccgcgcagctgctggcatgcggggctgcgggcgatggaggcgggcaaggcc
ggggccgagacctttctcaaggaactcgtctggcgcgaattcgcctggcatctgctctgg
cacagtccgcatatcgccgagcggaactggcgcgagggctgggacgatttcccctggtcc
acggatggcgacagccccgaggccaccgcctggaagcgcggccgcaccggcatccccttc
gtcgatgccgcgatgcgcgagatgcatgtgaccggcaccatgcataaccgcgcccggatg
gtcgcggcctcctggctgaccaagaacctgatgacccattggcgggtgggcatggactgg
tttgccgatcacctgaccgactgggatccggcctcgaatgcgatgggctggcaatgggtg
gccggatcgggccccgatgccgcgccctatttccggatcttcaatcccgagacgcaggcg
gcgaaattcgaccccgacggcgcctatcgcgacgcctggatcgccgaggggcggcagagc
cccggcccgggcgcgctggactatttcgacgcggtgccgcgcgcctgggggctgtcgccc
gacgccgcctatccggccccggcggtgacgcccgaggccgggcgccgccgcgcgctggcg
gcctatcaggcgcgggagggctag
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