Rhodovulum sulfidophilum: NHU_02849
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Entry
NHU_02849 CDS
T04143
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NHU_02849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_02849
Enzymes [BR:
rsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NHU_02849
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NHU_02849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAQ69996
UniProt:
A0A0D6B4K1
LinkDB
All DBs
Position
complement(2969580..2970371)
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AA seq
263 aa
AA seq
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MDPALTPHDALALLAWQVDLGATEAICETPVNRYEEVRPAPAPAAAARPGPSAPVPPARP
AAVDPVAVAQGAAAAATDLEGLAAAMAAYELCELKKGARNLVFSDGNPKARVMVIGEAPG
RDEDLQGKPFVGRAGHLLDLMFGRIGLGRGDPAAERALYITNVLPWRPPQNRDPEAGEVA
MMLPFLERHVDLVDPDILVLMGNHSCGALLGRKGITRLRGRWVEALGRPALPMFHPAYLL
RTQLAKRDAWHDLLMLQARLREG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgcactgaccccgcatgacgccctggcgcttctggcctggcaggtcgatctc
ggcgcgaccgaggcgatctgcgagacccccgtgaaccgctatgaggaagtccgccccgcg
ccggccccggcagctgcggcgcgtccgggaccgtcggcaccggttccgcccgcccggccc
gcggcggtcgatccggtggcggtggcgcaaggtgcggccgcggcggccaccgatctcgag
gggctggcggcggcgatggcggcctatgagctgtgcgagctgaagaaaggcgcgcgcaac
ctcgtcttttccgacggcaacccgaaggcgcgggtgatggtgatcggcgaggccccgggc
cgggacgaggatctgcagggcaagcccttcgtcggccgcgccgggcatcttctcgacctg
atgttcggccggatcgggctggggcggggcgatccggcggccgagcgcgcgctttacatc
accaatgtcctgccctggcggccgccgcagaatcgcgaccccgaggcaggcgaggtcgcg
atgatgctgcctttcctcgagcggcacgtggatctggtcgatcccgatatcctggtcttg
atgggcaaccattcctgcggcgcgcttctgggtcggaagggcatcacccggctgcgcggc
cgctgggtcgaggcgctgggccggcccgcgttgccgatgttccacccggcctatctgctg
cgcacccagctggccaagcgcgatgcctggcacgatcttttgatgctgcaggcgcggctg
cgggagggatga
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