Rhodovulum sulfidophilum: NHU_03813
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Entry
NHU_03813 CDS
T04143
Symbol
rsmB1
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rsu
Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsu03009
]
NHU_03813 (rsmB1)
Enzymes [BR:
rsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NHU_03813 (rsmB1)
Ribosome biogenesis [BR:
rsu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NHU_03813 (rsmB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
MTS
Methyltransf_11
Methyltransf_23
FtsJ
Methyltransf_15
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BAQ70937
UniProt:
A0A0D6B753
LinkDB
All DBs
Position
complement(3933200..3934513)
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AA seq
437 aa
AA seq
DB search
MEQAGAGMDEARERGTERTRAAALELIRAVLEDRRLIAELAGPEGPLEPLEPSERARAQR
LAVSTLRHMGRADAVLKPFLRRPPPPPIRAILRLATVEMLDGGAAAHGAVNAAVALARAD
RKTEALAGLVNAVLRKVADLPASDWQALPPPRLPGWLRGRLDSAWGRAAVVGIEAAHAAG
APLDLTPKDGDAAALAGATGGVALPTGSVRIAGPVQVSALPGYGEGAWWVQDAAAALPAR
LLAARPGERVLDLCAAPGGKTMQLAAAGAQVTALDISGQRMARLEENLARTELEAELVVA
DALGWGDDRRFDAILLDAPCSATGTIRRHPDLPLAKDGASVKPLFPLQSSLIDRALGLLA
PGGRLIFCTCSLLPEEGEAQLAAALERHPDLSPIAFEAPWIEPGWRAAHGALRLRPDFWT
ESGGMDGFFIAGLQMPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcgggggccgggatggacgaagcacgggaacgcgggaccgagcgcacgcgg
gcggcggcgctggagctgatccgcgcggtgctggaagaccggcgactgatcgccgaactg
gccggacccgagggcccgctggagcctctggagccctcggagcgcgcccgtgcccagcgg
ctggcggtgtcgacgctgcgccatatgggccgcgccgatgcggtgctgaagccgttcctg
cgccggccgccgccgccgccgatccgcgccatcctcaggctcgcgacggtcgagatgctg
gacggcggggccgcggcccatggcgcggtcaatgcggccgtggcgctggcccgggccgac
cgcaagaccgaggcgctggcggggctggtcaatgcggtcctgcgcaaggtggccgatctg
cccgccagcgactggcaggcgttgccgccgccgcgtctgccgggctggctgcgcggccgg
ctcgacagcgcctgggggcgggcggccgtggtcgggatcgaggccgcccatgccgcgggc
gcgccgctggatctgacgccgaaggatggcgatgccgcggcgctggccggggccacgggc
ggtgtggcgctgccgaccggctcggtccggatcgcgggcccggtgcaggtctcggcgctg
ccgggctatggcgagggcgcgtggtgggtgcaggacgctgccgcggcgctgcccgcgcgg
ctgctggcggcacggccgggcgagcgggtgctcgatctctgcgccgcgccgggcggcaag
accatgcagctggccgcggcgggcgcgcaggtcaccgcgctcgacatttccggacagcgc
atggcgcggctcgaggagaacctcgcccgcaccgagctcgaggccgagctggtcgtcgcg
gatgcgctgggctggggcgatgaccggcggttcgacgcgatcctgctggatgcgccctgt
tcggcgaccggcacgatccggcgccatcccgacctgcccctcgccaaggacggcgcgtcg
gtcaagccgctcttcccgctgcaatcgtcgctgatcgaccgcgcgctcggcctgctggcc
cccggcggacggctgatcttctgcacctgttcgcttctgcccgaggagggcgaggcgcag
ctggcggcggcgctcgaacggcacccggacctgtcccccatcgccttcgaggcgccctgg
atcgaacccggctggcgcgcggcccatggcgcgctgcggctgcggcccgatttctggacc
gaaagcggcggcatggacgggttcttcatcgccgggctgcagatgcctgcctga
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