Rhodovulum sulfidophilum: NHU_03884
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Entry
NHU_03884 CDS
T04143
Name
(GenBank) lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rsu
Rhodovulum sulfidophilum
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsu01011
]
NHU_03884
Enzymes [BR:
rsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NHU_03884
Peptidoglycan biosynthesis and degradation proteins [BR:
rsu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NHU_03884
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BAQ71008
UniProt:
A0A0D6B788
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All DBs
Position
complement(4002788..4004713)
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AA seq
641 aa
AA seq
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MRVLILAFLISLASPVCAADQSALAKAMVAVRADRWAEARQLARPAGQVALDIVEWRRLR
AGEGRLEEYRAFLARNPDWPGLGKVRSEAEGVIATGDDPSAIVAFFGSRDPVTGEGALRL
AEAEAALGRRGKAEAVAVSAWRRLPLAEPVQSAFLARYGRALAGHHTARLDALLWDGHDI
SAGRMLSLVPEGWQKLAAARIALRNQTPGVDALIAAVPTSLRDDPGLAYERFMWRTRKGR
GEDAIALLDARSGSAESLGRPARWAGWRRYYAHQVLREGDPKLAYRLAARHHLRAGASYA
ELEWLSGFIALRFLDRPETALKHFRAFEAAVRTPISLGRAGYWEGRALEAMGHPQEARAA
YAMGAQFQTSFYGLLSAERGGIAMDPSLTGKDHYPDWRAQPFARSSVIAAALLLHEAGEQ
NLVEMFLTHLAESVDPAGQRALAGLALELNDHHIALRIAKTAAATGNVMVEAYFPVTGIA
RSRHPVPTELVLSIVRRESEFDPSVASGAGALGLMQLMPTTAKAMADELSVRYSSSALTA
DPAYNARLGAAYLSHLVEEFGPNPVLVAAAYNAGPSRAHRWIAEQGDPRAAGVDVIDWIE
LIPFTETRNYVMRVTESLPIYRARLAGRTGALSLSKELKSN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcctgatccttgccttcctgatttcgctcgcctctcccgtgtgcgcggccgat
cagagcgcgctggccaaggccatggtcgcggtgcgcgccgaccgctgggccgaggcccgt
cagcttgcgcgcccggccggtcaggtcgcgctcgacatcgtcgagtggcggcggcttcgg
gcgggcgaaggccgccttgaggagtaccgcgcctttctggcccgcaatcccgactggccg
gggctcggcaaggtccggagcgaggccgagggcgtcatcgcgaccggtgacgatccgtcc
gccatcgtggcctttttcgggtcccgcgatccggtgaccggcgagggcgcgctgcggctg
gccgaggcagaggccgcgctgggccgcaggggcaaggccgaggcggttgcggtatcggcc
tggcgcaggctgccgcttgccgagccggtgcaatcggcgtttctggcgcgctatggccgt
gcgcttgcgggccatcacaccgcccggctcgatgcgctgctctgggacgggcatgacatt
tcggccggtcggatgctgagcctcgtgcccgagggctggcagaagcttgccgcggcgcgg
atcgcgctgcgcaaccagacccccggcgtcgatgcccttatcgcggcggtgccgacctcg
ctgcgcgacgatccggggctggcctatgaacgcttcatgtggcgcacccgcaagggccgg
ggcgaggatgcgatcgcgcttctggacgcgcgcagcggatctgccgaaagtctcggccgt
cccgcgcgctgggccgggtggcggcggtactatgcccatcaggtgctgcgcgagggcgac
ccgaagctcgcctatcgcctcgccgcccgccaccatctgcgtgccggggcaagctatgcc
gagctggaatggctgtcgggcttcatcgcgctgcgcttcctcgaccggcccgagaccgcg
ctgaaacatttccgcgccttcgaggcggccgtcaggaccccgatcagccttggccgggcg
gggtattgggagggccgcgcgctcgaggcgatgggccatccgcaggaggcccgcgccgcc
tatgcgatgggggcgcagttccagaccagcttctacgggcttctgtcggccgagcgcggc
ggcatcgccatggacccctcgctgaccgggaaagaccattaccccgactggcgcgcccag
ccctttgcccgcagctcggtgatcgcggcggccctgctgctgcatgaggcgggcgagcag
aacctcgtcgagatgttcctgacccatctggccgaaagcgtcgatccggccgggcagcgc
gcgctggccgggctggcgctggaactgaacgaccaccatatcgcgctgcgcatcgccaag
accgccgccgcgaccggcaatgtcatggtcgaggcctatttcccggtcaccgggatcgcc
cgcagccgccatccggtcccgaccgagctggtgctgtcgatcgtgcgccgcgaaagcgag
ttcgacccgagcgtggccagcggggcgggggctctggggctgatgcagctgatgccgacc
accgccaaggcgatggccgacgaattgtcggtgcgctattccagctctgccctgaccgcc
gatccggcctataacgcgcgtctcggtgcggcctatctgtcgcatctggtcgaggagttc
gggcccaatccggtcttggtcgccgcggcctataatgccggccccagccgggcgcatcgc
tggatcgccgaacagggagatccgcgcgcggccggggtggacgtgatcgactggatcgag
ctgatccccttcaccgagacccggaattacgtgatgcgggtcacggaatcgctgccgatc
taccgggcgcgtctggcgggcaggaccggcgcgctcagcctctcgaaagagctgaagtca
aactga
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