Rhodovulum sulfidophilum: NHU_04022
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Entry
NHU_04022 CDS
T04143
Symbol
pcnB
Name
(GenBank) poly A polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NHU_04022 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsu03019
]
NHU_04022 (pcnB)
Enzymes [BR:
rsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NHU_04022 (pcnB)
Messenger RNA biogenesis [BR:
rsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NHU_04022 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BAQ71145
UniProt:
A0A0D6B8F6
LinkDB
All DBs
Position
complement(4143367..4144536)
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AA seq
389 aa
AA seq
DB search
MTRVSGEPFFADHTQAVCALLTEAGYRALFVGGCVRNALLGVAVSDIDIATDARPGKVME
LAQAAGLKAVPTGFDHGTVTVVASHVPHEVTTFRRDVETFGRRAVVAFADSPEEDARRRD
FTMNALYATPAGEVLDPLGGMPDLRARRLRFIDDADARIREDYLRILRFFRFHAWYGDPS
NGLDPEGLAACAANSAGIETLSCERIGAELKKLLAASDPGPSIAAMAATGVLARTLPGAD
PRVLPVLIHLEAALGLAPDPIRRLAALGGEDVAGRLRLGKAEARRLGRLVEGAAAGEGPA
VLAYRAGPDVARDAVLLRAASLGADLPEGLGAEIARGAQARFPVAAADLMPRFSGPALGQ
MLKRLEADWIASDFRLDRAALIALAGRGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgggtctcgggcgaaccattcttcgccgatcacacccaggcggtctgtgcgctg
ctgacggaggccggataccgggcgctgttcgtcggcggctgcgtgcgcaacgcgctgctc
ggcgtggccgtgagcgatatcgacatcgccaccgatgcccgtcccggcaaggtgatggag
ctggcccaggcggccgggctcaaggcggtgccgaccgggttcgaccatggcacggtgacg
gtggtggcgtcgcatgtcccgcatgaggtgacgaccttccgccgcgatgtcgaaaccttc
gggcgtcgggcggtggtggcctttgccgacagccccgaggaagacgcccggcgccgcgac
ttcaccatgaacgcgctttacgccacccccgcgggcgaggtgctggacccgctgggcggc
atgcccgatctgcgggcgcggcggctgcgcttcatcgacgatgccgatgcccgcatccgc
gaggattatctgcggatcctgcgtttcttccggttccatgcctggtatggcgatccgtcg
aacgggctcgaccccgaggggctggccgcctgcgccgcgaattcggccggaatagagacg
ctttcgtgcgaaaggattggcgccgaactgaagaagcttctggccgcgtccgatccgggg
ccgagcatcgcggcgatggccgcgacgggcgttctggcacggacccttcccggcgccgat
ccgcgagtgctgccggtcctgatccatctcgaagcggcgctggggcttgcccccgatccg
atccggcggctggcggcgctggggggcgaggacgtggccgggcggttgcggctgggcaag
gccgaggccaggcggctcgggcgtcttgtcgaaggcgcggcggcgggcgagggaccggcg
gtgctggcctatcgggcggggcccgatgtggcacgggacgcggtcctgctgcgtgcggcc
tcgctgggcgcggacctgcccgaaggtctcggggccgagatcgcgcgcggcgcccaagcg
cgctttccggtcgcggccgccgatctgatgccgcggttttccggacccgcgctggggcag
atgctgaagcggctggaggcggactggatcgcgtcggacttccggctggaccgcgcggcg
ctgatcgccctggcggggcgcggcgactag
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