Rhodovulum sulfidophilum: NHU_04049
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Entry
NHU_04049 CDS
T04143
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03030
DNA replication
rsu03430
Mismatch repair
rsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHU_04049 (dnaQ)
03430 Mismatch repair
NHU_04049 (dnaQ)
03440 Homologous recombination
NHU_04049 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsu03032
]
NHU_04049 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_04049 (dnaQ)
Enzymes [BR:
rsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHU_04049 (dnaQ)
DNA replication proteins [BR:
rsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHU_04049 (dnaQ)
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHU_04049 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BAQ71172
UniProt:
A0A0D6B7V2
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All DBs
Position
4171766..4172503
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AA seq
245 aa
AA seq
DB search
MREIVLDTETTGFEPETGDRIVEIGAVVLWNHLPTGETFHVYTNPGRDMPDEAFGVHGIG
PDILANPRPAKPGEVTLRDKPPFSKVGQKFLDFVQDSKLVIHNASFDMKFLNAELGWLGL
PKLPMSQAIDTLAMARKKFPGSPATLDALCRRFGIDNTMRDKHGALLDSEILADVYLELI
GGRQPDFMLATRSRASRGTSGTETEAWRPRPRPTPLPSRLTEEEAAAHRAFVETMGDDAL
WKSFY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgttctcgacaccgaaaccacgggcttcgaacccgagaccggcgaccgg
atcgtcgagatcggcgccgtcgtgctctggaaccatctgccgaccggcgagaccttccat
gtctataccaatcccggccgcgacatgccggacgaggccttcggcgtgcacgggatcggt
cccgacatcctggccaacccgcgacccgcgaagcccggcgaggtcacgctgcgcgacaag
ccgcccttttcgaaggtcggacagaaattcctcgattttgtgcaggattcgaaactggtg
atccacaatgccagtttcgacatgaaattcctgaatgccgaactgggctggctcggcctg
cccaagctgccgatgagccaggcgatcgacacgctggccatggcgcgcaagaagtttccc
ggctcgcccgcgacgctggacgcgctctgccgccgcttcggcatcgacaataccatgcgc
gacaagcacggcgccttgctcgattccgagatcctggccgatgtctatctggaactgatt
ggcggtcggcagcccgatttcatgctggcgacccgctcccgggcctcgcgcggcacgtcc
gggaccgaaaccgaggcctggcggccgcgtccgcggccgacgcccctgccctcgcgtctg
accgaggaggaggccgccgcccatcgtgcctttgtcgagacgatgggcgacgacgcgctt
tggaaaagcttctactga
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