Ruania suaedae: LQF12_02630
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Entry
LQF12_02630 CDS
T08275
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rsua
Ruania suaedae
Pathway
rsua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQF12_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsua03000
]
LQF12_02630
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_02630
Enzymes [BR:
rsua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LQF12_02630
Transcription factors [BR:
rsua03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LQF12_02630
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQF12_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
UFU03525
LinkDB
All DBs
Position
complement(571621..572520)
Genome browser
AA seq
299 aa
AA seq
DB search
MHITTIELPTASPFDGEALWAYLAARTVAGVEDIDGARYRRAVHLAHGPGVLELRRPEPE
ATAPGVLRATVRLSVPADRAQAESIVRRTADLDRDPTDVLEGLGAHPWLGPLVRARPGLR
APQHPGGFEVAVRAVLAQQVSLTAARTHAARLVTATGTRLPTPVGTVTHVFPTPAQVAAL
GTDDTAQESVLAMPAGRRRAVLALSRAVLEGMDLDGGISADEAEAALLAVPGIGPWTAQY
VRMRAFGDPDAYCGTDLVLRRTAVGLSGAPADPRGTEFAPWRTYAAHHLWRHAQLEGPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcacatcaccacgatcgagctgcccacagcgtctccgttcgacggggaggcgctgtgg
gcatacctcgccgcacgcacggtggccggcgtggaggacatcgacggcgcccggtaccgc
cgggccgttcacctcgcccatggtccgggggttctcgaactccgccgccccgagccagag
gccacggcccccggggtgctgcgcgccactgtccgactgagcgttcccgccgaccgggcc
caggcggagtcgatagtgcgacgcacggccgatctggaccgggatcccaccgacgtcctc
gaggggctcggcgcccatccgtggctgggaccgctggtgcgggcacggcccggcctgcgc
gctccgcaacatccaggaggcttcgaggtggcagtgcgcgcggtgctcgcgcaacaggtg
tcgctgacagcggcacgcacccacgccgcccggttggtgaccgcgacggggacgcgccta
cccaccccggtcgggacagtgacgcacgtgttcccgacgcccgcgcaggtcgccgccctc
ggcacggacgacaccgcacaggaaagcgtcctcgccatgccggccggacgccgtcgcgcg
gtgctcgcgctgagccgcgcggtactggagggaatggacctggacggggggatcagtgcc
gatgaggccgaggcggcgttgctcgccgtccccggcatcggcccctggacggcccagtac
gtgcggatgcgcgctttcggcgatccggacgcctactgcggcaccgacctcgtgctgcgc
cgaacggccgtggggctcagcggcgccccggcagacccacgcggtacggagttcgcaccc
tggcgcacctatgcggcgcaccatctgtggcggcacgcccagctggagggaccggcatga
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