Ruania suaedae: LQF12_03270
Help
Entry
LQF12_03270 CDS
T08275
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsua
Ruania suaedae
Pathway
rsua00300
Lysine biosynthesis
rsua00470
D-Amino acid metabolism
rsua01100
Metabolic pathways
rsua01110
Biosynthesis of secondary metabolites
rsua01120
Microbial metabolism in diverse environments
rsua01230
Biosynthesis of amino acids
Module
rsua_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQF12_03270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQF12_03270
Enzymes [BR:
rsua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LQF12_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UFU03643
LinkDB
All DBs
Position
complement(714326..715729)
Genome browser
AA seq
467 aa
AA seq
DB search
MTSDPRALVHGIAPLTARTEPWMDRLLADPERCVQLLEEFGSPVNLLDFRPLERHVRRLH
EVAVAQGVDLGVFVARKANKAVGLIDAARAAGAGVDVASWTELDQSLRAGMPCERIIVSA
AVKDRRLLATALESGAVLSIDNRDELTDLIEEAGRSGLTARVALRLSIVAPGVAATRFGL
PAQQWMHDLDSVDTRHLNIVGLHFHLHGYAVADRVAGLREAMKTVPILRAQGHPVRFVDM
GGGLPVRYLADERQWRDFWYRLGSEPSRLTWRGDTLGMTDPTADRPSPEVYPFWQPLDAG
TWLHEVLTSHLDQHRTVAEGLAELELALHCEPGRAMLDGCGLTLARVAFRKQTSDGEPLV
GLFMNRTQMRSTSRDVLLDPLWIRPDGGRPPSEPGDGFLVGAYCIEEELLLRRRLRFPAG
VGRDDIAVFVNTGGYLMHILESPSHQLPLAATVVADGGSWRRDAVDL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgacccccgcgccctcgtgcacggtatcgctccgctgacggcacggaccgag
ccctggatggaccggctgctcgccgatcccgagcgctgcgtgcagctgctggaggagttc
ggctcccccgtgaacctgctcgacttccgaccgctcgagcgtcacgtgcgccggctccac
gaggtcgcggtggcgcagggcgtcgacctgggcgtcttcgtcgcccggaaggcgaacaag
gcggtgggcctgatcgatgcggcacgggcggcgggcgccggggtcgatgtcgcctcgtgg
accgagctggatcagagcctgcgtgcggggatgccgtgcgagcggatcatcgtctcggcg
gcagtcaaggaccgccgactgctcgccaccgccctcgagagcggggccgtcctcagcatc
gacaaccgcgacgaactcaccgacctcatcgaggaggccggccgctccggtctcaccgca
cgggtggcgttgcggctgtcgatcgtggcaccaggggtggcggccacgcgtttcggcctc
ccggcgcagcagtggatgcacgacctggacagtgtcgacacccggcacctgaacatcgtc
ggactgcacttccacctccatggctacgccgtggcggaccgcgtggccgggctgcgggag
gcgatgaagaccgtaccgatcctgcgcgctcaggggcatcccgtccggttcgtcgacatg
ggtggcggactacccgtgcggtacctcgccgacgaacggcagtggcgggacttctggtac
cggctgggctccgagcccagccgcctcacctggcgcggtgacacgctggggatgacggac
ccgaccgcggatcggccctcgcccgaggtgtatccgttctggcagccactcgacgccgga
acctggctgcacgaggtgctcacctcacacctggaccagcaccgaaccgtggccgagggc
ctcgccgagctcgagctcgcgctgcactgtgaacccggccgcgcgatgctcgacggctgc
ggcctcaccctcgcccgggtggcgttccgcaagcagaccagcgacggcgaaccgctggtc
ggcctgttcatgaaccgtacgcagatgcgctccacctctcgcgacgtcctgctcgacccg
ctctggatacgccccgacggcggcaggcccccgagcgagcccggcgacggcttcctggtg
ggggcgtactgcatcgaggaggagctgctgctgcgccgccgactccgctttcccgcgggt
gtcggcagggacgacatcgccgtattcgtcaacaccggcggctacctcatgcacattctc
gagagcccgtcccaccagctgcccctcgccgccacggtcgtggcggacggcgggtcctgg
cgccgggacgccgtcgacctctga
DBGET
integrated database retrieval system