Ruania suaedae: LQF12_03390
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Entry
LQF12_03390 CDS
T08275
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsua
Ruania suaedae
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsua03032
]
LQF12_03390
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_03390
Enzymes [BR:
rsua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LQF12_03390
DNA replication proteins [BR:
rsua03032
]
Prokaryotic type
DNA Topoisomerases
LQF12_03390
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQF12_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
UFU04569
LinkDB
All DBs
Position
744027..744608
Genome browser
AA seq
193 aa
AA seq
DB search
MGSEAYEAEHGSFGLATLRKQHLRLRRDGVAVFDYPAKSGQHRHLELDAEELLAPLALLR
RRRSGGDRLLAHRTGQGWEPLGTTTIASYLKDRLGTDASAKDFRTWHATVLAAVTLAAAG
PAEDEATIRDHLTRTIADVADHLGNTPAVSRSAYIDPRVLEAYRSEGALELPAPDSEPDE
VSERAVRTLLRES
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atcggttccgaggcgtacgaggccgagcacggcagcttcgggctggcgaccctgcgcaag
cagcacctgcgactgcgcagggacggggtcgccgtcttcgactatcccgccaagtccggt
cagcaccggcacctggagctcgacgcggaggagttgctcgcgccactggccctgctgcgc
cgccggcgatccggcggtgaccggttgctcgcccatcgcaccggccaggggtgggaaccg
ctgggcaccacgacgatcgcgtcctacctcaaggacaggctgggcactgacgccagcgcc
aaggacttccgaacctggcacgccacggtgctcgccgcggtgaccctcgcggcggccggg
cccgccgaggacgaagccaccatccgcgatcacctcacccgcacgatcgccgacgtggcc
gaccacctcggcaacacccccgcggtcagccgctcggcctatatcgacccgcgcgtgctc
gaggcctaccggagcgagggcgcgctcgaactcccggcgccggactcggagccggacgag
gtgagcgagagggcggtgcgcacgctgctgcgggagtcgtga
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