Ruania suaedae: LQF12_03535
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Entry
LQF12_03535 CDS
T08275
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rsua
Ruania suaedae
Pathway
rsua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQF12_03535 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_03535 (recD)
Enzymes [BR:
rsua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LQF12_03535 (recD)
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQF12_03535 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
AAA_16
SLFN-g3_helicase
AAA_28
DO-GTPase1
nSTAND3
SRP54
NTPase_1
AAA_5
ABC_tran
MukB
TrwB_AAD_bind
T2SSE
DEAD
Mg_chelatase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UFU03691
LinkDB
All DBs
Position
complement(771859..773817)
Genome browser
AA seq
652 aa
AA seq
DB search
MSVTTANPPLRPEGDVRSAVAAPPLLAQFNAAGLVTATDVQVATRLGRLTGEMDERVLLA
AALTVRALRGGSVCLHLGEPAELEALRIPDDAGSEPEASAEPPQWPEHAAWVEAVQASPM
VTLGADAAGSAGDDVRPVRWVNGRLYLDRYWRDELTVRRLIDARLTEADLPVADGREALA
RLFPEASDSKQRLAATHALRRRLTVLTGGPGTGKTTTVARLLAVLQDVDGQLRVALAAPT
GKAAARLQEAAAEVIGGLQDEDKDRVGAPEATTVHRLLGYKPGSTTRFRHDSRHHLPHDV
VVVDETSMVPLSLMARLLEALRPEARLVLVGDPDQLASVEAGAVLGDLVARPPVAEAPAG
LAVEPDEPSADPDAQTQGGESRLTSDLGNGVVRLTTVHRQQQGSEILPLAAAIRAGDAER
VLELLRAGRHGVELVAADVERLDEAAVASVRADAIRAGTSLVTHARAGDAAAALTALGEH
RLMLAHRRGPAGVVRWAAQVETWVQESLAASGAPGARAPSAGNPWAVGRPILVTSNDQAV
GLYNGDTGVLVADGETVVAAFGDPARPVLVRTHRLPPVETVHAMTVHRAQGSQFTRVSLI
LPPAASPLLTRELLYTAVTRARAFVRVVGSEEAVRAAVEHPVRRASGLREPL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaccacggcgaacccgcccctgcggcccgagggtgacgtgcgctcggccgtc
gcagcgccgccactcctggcgcagttcaacgccgccggcctcgtgaccgcgacggacgtg
caggtcgccacccggctgggccgtctcaccggtgagatggacgagcgggtgctgctcgct
gccgcgctgaccgtccgggcgctgcgcggggggtcggtgtgcctgcacctgggagagccg
gccgagctggaggcgctgcgtatccccgacgatgccggctccgagccggaggcgtcggcg
gagccgccgcagtggcccgagcacgccgcctgggtcgaagcggtgcaggcgagcccgatg
gtcaccctcggagcggacgctgccggtagcgccggcgacgacgtgcgaccggtgcgctgg
gtgaacgggcggctctacctcgaccgctactggcgggacgagctgaccgtacgccggctg
atcgacgcccggctgacggaggcggatctgccggtcgccgacggtcgcgaggcgctggcg
cgactgttcccggaggcgagcgacagcaagcagcggctcgccgcgacacacgcgctgcga
cggcggttgaccgtgctcaccggcgggccgggaacgggcaagacgaccaccgtggcgcgg
ctgctcgcggtgctgcaggacgtcgacggtcagcttcgcgtggccctcgcggcgcccacg
gggaaggcagcagcacggttgcaggaggcggcggccgaggtgatcggggggctccaggat
gaggacaaggatcgagtgggcgcaccggaggcgacgacagtgcaccggctgctcgggtac
aagccgggcagcaccacccgcttccggcacgactccaggcaccaccttccccacgatgtg
gtggtggtcgacgagacgtcgatggtgccgctgtcactgatggcacggttgctcgaggcg
ctgcgccctgaggcacggctggtgctggtcggggacccggaccagctggcctcggtggag
gcaggcgccgtgctcggtgacctggtggcccggccgccggtggccgaggcgcccgcaggg
ctggcggtcgagccggacgaacccagcgcggacccggacgcacagacacagggcggtgag
tcacggctgacgtccgatctgggcaacggggtggtgcgactgaccacggtgcaccggcag
cagcagggatcggagatcctgcccttggcggccgcgatccgggccggcgacgccgagcgc
gtgctggaactgctgcgcgcgggccggcacggggtcgagctggtggcggcggacgtcgag
cggctggacgaggccgcggtggcaagcgtgcgcgcggacgccatccgggccggcacgagt
ctcgtgacgcacgcccgcgccggcgatgccgcagcagcactgaccgcactgggcgagcac
cggctgatgctcgcgcaccggcgcgggcccgcgggcgtggtccgatgggccgcccaggtg
gagacatgggtgcaggagagtctggcagccagcggcgcaccaggagcccgggcgccctcg
gccggtaacccctgggccgtcgggcgtccgatcctggtgaccagcaacgaccaggccgtg
gggctctacaacggtgacacgggcgtgctcgtcgccgacggcgagacggtggtcgccgca
ttcggggacccggcccggccggtactggtgcgcacgcaccggctcccgccggtcgagacc
gtgcacgcgatgacggtgcaccgtgcgcagggcagccagttcacccgggtgtcgctgatc
ctgccgccggcggcctcaccgctgctgacccgcgagctgttgtacaccgccgtgacccgt
gcgcgggcgttcgtgcgcgtggtgggcagcgaggaggccgtccgagcagcggtcgagcac
ccggtgcggcgagcgagcgggctacgcgagccgctctga
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