Ruania suaedae: LQF12_03540
Help
Entry
LQF12_03540 CDS
T08275
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rsua
Ruania suaedae
Pathway
rsua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQF12_03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_03540
Enzymes [BR:
rsua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LQF12_03540
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQF12_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UFU03692
LinkDB
All DBs
Position
complement(773814..777311)
Genome browser
AA seq
1165 aa
AA seq
DB search
MTGPAAPHSPRSTVFDVCGDLPVGTTVLEASAGTGKTFTIAALAARYVAEGVAELKDLML
VTFGRAATSELRDRVRERLVGTERALRAPDAARSSDAIVALLADTDEDELGRRRARLARA
LSQLDAATITTTHGFCQQMLTALGIAADVDPAATFVPDVADLVREVTDDLYVQEFSDEKQ
PRLSPDELYALGRAAVSDHGAQLEPKTDDTTDLGGLRYRLAVAVRAETERRKRVGHLMDY
DDLLVLLRDALRDPRNGAAAAQRIRERYRVVMVDEFQDTDPVQWEILRTAFHTHRTLVLI
GDPKQAIYAFRGADVEAYLEAKHDAVTTATLGTNWRSDASLLSALHAVLGGAALGHEEIS
VGPVSPAHHEPRFDGGPAVRLRQVTREALGVRPGKDPFVGDVRSFIAADTAADIVERLGR
AQVRDEGHWRVLQPGDVAVLTRTNAQAEQVRAELSARGVPAVVSGLSSVFATPAARDWLT
LLDALEQPGSHPRASALALTAFVGWDGHRLATASDSDRDRLAETVRTWSRLLSGRGVAAL
HEALTRGGIAERLMRTTTGERQLTDLRHVGEVLHSVAVTEGLGAAALTGWLRRRIREATR
DFEEERSRRLETDAAAVQVVTVHASKGLEFGVVYVPFAWDRYESSTPSILGFHAGDGRRI
LHVGGQGSHLYREARERYQREDRGEDLRLLYVALTRAQHQVVAHWAPSRNSAKGPLTRVL
LGARDLGGEPAVAADTGALRDEAVTEAFADIAHRSGGTIAAEVAPADPRRQRWDPPDLTS
PALAVAHLDRLPDAGWRRASYTALTAAAHQGHHAHRTLAQAAPVEADRGEAGVLSEPEDA
GVLDEPASNDEGITLTRATAAPAPGAEAPSPMADQPAGAAFGTLVHEVLEYADTAAPDLD
AELLARCRAASSARVDGLDVDALAAALGTVMRTPLGPLAAERTLAEFAPSDRLSELEFEL
PLAGGDGDTSTRDVGAERMEAATLHDVAATLEAHLDAGDPFAPYPQMLRALAADPQGPAE
LRGYLTGSIDAVLRVHGDQGQPQFLVCDYKSNRLGGPGSELTLHDYRPGAVMEAMLDAHY
PLQLLLYLVGLHRYLRWRMHEYDPGVHLGGGLYLFVRGMAGAHTPVGPDGSPYGVLAWRP
PPGLVPALSELLDGGPHRTGKDGTR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgactggccctgccgcgccgcacagcccgcgctcgaccgtgttcgacgtctgcggcgac
ctaccggtgggcacgaccgtgctggaggccagcgccggcaccgggaagaccttcaccatc
gccgccctcgccgcccgctacgtcgccgagggggtggccgagctgaaggacctcatgctg
gtcaccttcgggcgcgccgccacctcggaactgcgcgaccgcgtgcgcgagcggctcgtg
ggcaccgagcgagcgctgcgcgcacccgatgcggcccgcagctccgatgcgatcgtggcg
ctgctcgccgacacggacgaggacgagctgggacggcggcgagctcgcctggcccgggca
ctctcgcagctggacgcggccacgatcaccaccacccacgggttctgccagcagatgctg
accgccttggggatcgcggccgacgtcgacccggccgccaccttcgtcccggatgtggcc
gacctcgtccgggaggtgaccgatgacctctacgtgcaggagttctccgacgagaagcag
ccacggctgagcccggacgagctctacgcgctcgggcgcgccgccgtcagtgaccatggc
gcgcagctggaaccgaagacggacgacaccaccgatctcggtgggctccggtaccggctg
gcggtggcggtgcgggccgagaccgaacggcgcaagcgcgtcgggcacctgatggactac
gacgacctgctggtactgctgcgggacgccctacgcgacccccggaacggcgcggccgct
gcgcagcggatccgcgagcgctaccgggtcgtcatggtggacgagttccaggacaccgac
ccggtgcagtgggagatcctgcgcaccgccttccacacccaccgcacgctggtgctgatc
ggggacccgaagcaggccatctacgccttccgcggtgccgacgtggaggcctatctggag
gccaagcacgacgccgtcaccacggccaccctcgggaccaactggcgcagcgacgcctcc
ctcctgagcgccctgcacgccgtgctcggcggtgcggccctggggcatgaggagatctcc
gtaggcccggtctcccccgcccaccacgaaccccgtttcgacggcggaccggccgtgcgg
ctgcgccaggtcacgcgcgaggcgctcggggtgcgaccgggcaaggaccccttcgtcggc
gacgtccgctcgttcatcgctgccgacaccgcggcggacatcgtcgagcggctcggacgc
gcgcaggtgcgggacgaagggcactggcgcgtcctgcaaccgggggacgtggcggtcctg
acccggacgaatgcccaggccgagcaggtgcgggccgagctcagcgcccggggtgtgccg
gccgtcgtctcggggctgtcaagcgtgttcgccacccccgccgcccgcgactggctgacg
ctgctggacgcgctcgagcaacccgggtcgcacccacgtgcctcggccctcgcgctgacc
gccttcgtcggatgggacggacaccggctcgccactgcgagcgacagtgaccgcgatcgg
ctcgccgagacggtgcgcacctggtcacggctgctcagcgggcgcggagtggcggcgctg
cacgaggcactgacccgcggggggatcgccgagcggctgatgcgcaccaccaccggcgag
cggcaactgaccgatctgcggcacgtgggagaggtgctgcactcggtcgctgtgaccgag
ggcctgggtgccgcggcactgaccggatggctgcgccgccggatccgggaggcgacccgc
gatttcgaggaggagcgcagccggcggttggagaccgatgcggcggccgtgcaggtggtg
accgtgcacgccagcaagggcctggagttcggggtggtgtacgtgcccttcgcgtgggac
cggtacgagtcctccactccctccatcctcggctttcacgccggtgacgggcgtcggatc
ctgcacgtgggcgggcagggctcgcacctgtatcgcgaggcgcgcgagcgctaccagcgt
gaggaccggggtgaggacctgcgcctgctgtacgtggcactgacacgagcccagcaccag
gtggtcgcgcactgggcgccctcgcgcaattctgccaaggggcctttgacgagggtgctg
ctcggcgcccgggacctcggcggcgaaccggcggtggcagccgacaccggcgcgctgcgg
gacgaggcggtgaccgaggcgttcgcggacatcgctcaccgttccggtggcacgatcgcg
gccgaggtggcaccggcggacccgcgccggcagcggtgggacccgccggacctgacctcc
cccgcacttgccgttgcccacctggaccggctgcccgacgccggctggcggcgcgcctcc
tacaccgcactgacggcggcggcgcaccagggccaccacgcgcaccggacgttggcgcag
gcggcgccggtcgaggcggaccggggcgaggcaggagtgctcagcgaacccgaggatgcc
ggggtcctggacgagcccgcgagcaacgacgaaggcatcacgctcacccgggcgaccgcg
gcgccggcgccgggcgccgaggcaccgtccccgatggcggaccagccggccggagcagcg
ttcggcacattggtgcacgaggtgctcgagtacgccgacaccgcggcgccggatctggac
gccgagctcctcgcccgctgccgtgcggcgtcctccgcgcgggtggacgggttggacgtg
gatgccctcgctgcggcgctgggcacggtgatgcgcaccccgctgggtccgctggcggcc
gagcggacgctcgccgaattcgcgccgtcggaccgtctctcggagctggagttcgagctg
cccctggcgggtggggacggcgacacgagcacgcgggacgtaggggccgaacgcatggag
gccgccacgctgcacgacgtggcggccaccctcgaggcacacctcgacgccggggacccg
ttcgcgccctacccgcagatgctgcgggccctggccgccgacccgcagggtccggccgag
ctgcgcggatacctgaccggttcgatcgacgcggtgctccgggttcacggggaccagggg
cagccacagttcctggtgtgcgactacaagtcgaatcgcctgggaggcccggggagcgag
ctgacgctgcacgactaccgacccggcgccgtcatggaggcgatgctggacgcgcactat
ccgctgcagctgttgctctacctggtggggctgcatcgctatctgcggtggcggatgcat
gagtacgatcccggggttcacctgggcggcggcctctacctcttcgtgcggggcatggcc
ggcgcccacaccccggtcgggccggacgggtcgccgtacggggtcctggcatggcgtccg
ccgcctggtctggtgccggcactgtccgaactgctcgacggcggaccgcaccgaacaggc
aaggacggcacccgatga
DBGET
integrated database retrieval system
