Ruania suaedae: LQF12_04570
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Entry
LQF12_04570 CDS
T08275
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rsua
Ruania suaedae
Pathway
rsua00260
Glycine, serine and threonine metabolism
rsua00460
Cyanoamino acid metabolism
rsua00630
Glyoxylate and dicarboxylate metabolism
rsua00670
One carbon pool by folate
rsua00680
Methane metabolism
rsua01100
Metabolic pathways
rsua01110
Biosynthesis of secondary metabolites
rsua01120
Microbial metabolism in diverse environments
rsua01200
Carbon metabolism
rsua01230
Biosynthesis of amino acids
rsua01240
Biosynthesis of cofactors
rsua04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LQF12_04570
09102 Energy metabolism
00680 Methane metabolism
LQF12_04570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LQF12_04570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LQF12_04570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LQF12_04570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LQF12_04570
Enzymes [BR:
rsua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LQF12_04570
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
UFU03889
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Position
1013845..1015152
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AA seq
435 aa
AA seq
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MTQSVSEQSSTPVRDQSLAELDPDIAAVLEGELTRQRDTLEMIASENFVPRAVLQAQGSV
LTNKYAEGYPGKRYYGGCEQVDIAENLAIDRAKALFGAEYANVQPHSGATANAAVLHALA
TPGETILGLSLAHGGHLTHGMKINFSGKLYNVAAYGVDPDTYRVDMDAVREAALEHRPKV
IIAGWSAYPRQLDFAAFREIADEVGAYLWTDMAHFAGLVAAGLHPSPVPHSDVVSTTVHK
TLGGPRSGLILARDAEAFGKKLNSAVFPGQQGGPLMHVIAAKAVALKVAAGEEFKERQER
TVAGAQIIAERLTGSDVAGAGVSVLTGGTDVHLTLVDLRDSALDGQQAEDLLHAAGITVN
RNAVPFDPRPPRVTSGLRIGTPALASRGFGETEFREVADIIAGVLAAGEGADIDAATARV
KALTDAFPLYPGLQQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtccgtgagcgagcagtccagcaccccggtgcgtgaccagagcctcgccgag
ctcgaccccgacatcgccgccgtcctcgagggcgagctgacccgtcagcgtgacaccctc
gagatgatcgccagcgagaacttcgtgcctcgcgccgtcctgcaggcgcagggctcggtg
ctgacgaacaagtacgccgagggctacccgggcaagcggtactacggaggctgcgagcag
gtcgacatcgccgagaacctcgcgatcgaccgggccaaggcgctcttcggcgccgagtac
gccaacgtccagccccactccggcgcgacggcgaacgcggccgtgctgcacgccctcgcc
accccgggcgagaccatcctcgggctctccctcgcccacggtggtcacctcacccacggg
atgaagatcaacttctcgggcaagctgtacaacgtcgccgcctacggcgtggaccccgac
acctaccgggtggacatggacgccgtgcgcgaggccgcgctcgagcaccggccgaaggtg
atcatcgccgggtggtcggcctacccgcgccagctcgacttcgccgccttccgcgagatc
gccgacgaggtcggcgcctacctgtggaccgacatggcccacttcgccggtctggtggcg
gcgggcctgcacccgagcccggtgccccactccgacgtcgtctccaccaccgtgcacaag
accctcggtgggccgcgctcgggtctgatcctggcccgtgacgccgaggcgttcggcaag
aagctcaactcggccgtcttcccgggccagcagggtggcccgctgatgcacgtcatcgcc
gccaaggcggtggccctcaaggtggccgcgggggaggagttcaaggagcgccaggagcgc
acggtggccggcgcgcagatcatcgccgagcgcctcaccggatccgacgtcgcgggcgcc
ggggtctcggtgctcaccggcggcaccgatgtgcacctgaccctggtcgacctgcgcgac
tccgcactcgacggccagcaggccgaggacctcctgcacgcggccgggatcaccgtcaac
cgcaacgccgtgcccttcgacccgcgcccgccgcgggtgacctccgggctgcggatcggc
accccggcactggcctcccgcggcttcggcgagaccgagttccgcgaggtggccgacatc
atcgccggtgtgctcgccgccggtgagggcgccgacatcgacgccgccacggcccgggtg
aaggccctgaccgacgcgttcccgctctaccccgggctgcagcagtga
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