KEGG   Ruania suaedae: LQF12_05300
Entry
LQF12_05300       CDS       T08275                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rsua  Ruania suaedae
Brite
KEGG Orthology (KO) [BR:rsua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsua03032]
    LQF12_05300
   03036 Chromosome and associated proteins [BR:rsua03036]
    LQF12_05300
   03400 DNA repair and recombination proteins [BR:rsua03400]
    LQF12_05300
DNA replication proteins [BR:rsua03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LQF12_05300
Chromosome and associated proteins [BR:rsua03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LQF12_05300
DNA repair and recombination proteins [BR:rsua03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LQF12_05300
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 DUF5321
Other DBs
NCBI-ProteinID: UFU04014
LinkDB
Position
1172213..1172494
AA seq 93 aa
MSVNRTELVAAIAEKAGLTKTDADAALGALQEVLVESLGKGEAVKVTGLLSVERVERAAR
TGRNPRTGEEIQIPAGYGVKVSAGSALKKAVTK
NT seq 282 nt   +upstreamnt  +downstreamnt
gtgtccgtcaaccgcactgagctcgttgccgccatcgccgagaaggctggactgaccaag
accgacgccgacgccgccctgggcgcgctgcaggaggtcctcgtggagtccctcggcaag
ggcgaggccgtcaaggtcaccggcctgctctccgtggagcgcgtcgagcgcgccgctcgc
accggacgcaacccgcgcacgggcgaggagatccagatcccggccggctacggcgtcaag
gtctccgccggttcggccctgaagaaggccgtcaccaagtga

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