Ruania suaedae: LQF12_05990
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Entry
LQF12_05990 CDS
T08275
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
rsua
Ruania suaedae
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsua03036
]
LQF12_05990 (smc)
Chromosome and associated proteins [BR:
rsua03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LQF12_05990 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
UFU04136
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All DBs
Position
1308943..1312521
Genome browser
AA seq
1192 aa
AA seq
DB search
MHLKTLTLRGFKSFASATTLSLEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGA
MADVIFAGTSSRPPLGRAEVSLTIDNADGALPIEYSEVTISRTLFQGGGSEYAINGNACR
LLDIQDLLSDSGLGREMHVIVGQGRLDAVLQATAEERRGFIEEAAGVLKHRKRKDKALRK
LEAMAANLARVSDLTGEIRRQLGPLAKQADVARRAQVVQVDLRDARARLLADDLVQLTSS
LAQEIEDETALRQERDAVEKAQQDARAELTRLEGEAAAAAPALSEATEMWYRLSSLRERL
RGTETLAAERCRLLGAPVAAEENRRDPDDLEAQAARAREAEAELATEAQQAREALEAAVG
ERSRAEQRSAEAEKALAAVHRGVADRREGLARLTGQVAATRGKVEAAEAELERLRHDLAA
ATERARAAGQEFAALEQQAVGQAEGEEDLDAAHERAVEALERAQEDVRALTESEREADGA
RATATARRDALALSLTRKDATATVLEADGLIGVLGPVAELLTVEPGYEAAVTAALGPLAD
AAALDSVDAAVDALRHVRAEDAGQARLLLARSHESESASEPAPEPSPAPPAGRWAVEVVR
GAESIRGALALLLRDVVVVEDLASARRVCAESGRLVAVTLDGDVIGPAHARGGSTAGPSV
LELHAAREEAEKQIAAAAAQTEQARFALGPAREAVASAQAEVDRTLTALHDSDAELAAVA
ERLGQHGSAMRAANAEAERIAPAIEKAEHARTEHAEALAEIADRLARAQQEPVESENELA
AATEERDRWSEAATTARAQETDARLVLRTVEERVRALSGRAESLERAAKAEREAREAAER
RARRRAAQAEVAATVREGATRALAAIEHSLQLAAGRRQGAEDERARRDEALTEVRGRLDE
LSARHSRLTDVVHRDEVARAEQKLRIDQLEQRAVDELGLDPEVLVAEYGPDQLVPPVPAP
GQEAAEEPRPYVRAEQEKRLRAAERALTLLGKVNPLALEEHAALEERHKFLTDQLADLKK
SRADLLDIVAQIDARVEEVFTSAYADTAAQFEQVFSRLFPGGEGRLVLTEPGDMLTTGIE
VEARPPGKKVKRLSLLSGGERSLTAVALLVAIFKARPSPFYVMDEVEAALDDVNLGRLLE
IFRELRSDSQLIVVTHQKRTMEIADALYGVTMRGDGVTTLISQRLAEREDAG
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaagacgctgacgctgcgaggattcaagtccttcgcgtctgcgacgacgctc
tccctcgagcccggtatcacctgtgtggtggggcccaacgggtccgggaagtccaacgtg
gtcgacgccctcgcctgggtgatgggcgagcagggggcgaaatcgttgcgcggcggggcc
atggccgatgtcatcttcgccgggacgtcctcgcggccgccgctgggccgggccgaggtc
tcgctgaccatcgacaacgccgacggcgccctcccgatcgagtacagcgaggtcaccatc
tcgcgcaccctgttccagggcgggggctccgagtacgcgatcaacggcaacgcgtgccgg
ctgctcgacatccaggatctgctctccgactccggtctgggccgggagatgcacgtgatc
gtcgggcaggggcgcctggacgcggtcctgcaggccaccgcggaggagcggcgcgggttc
atcgaggaggccgccggtgtgctcaagcaccgcaagcgcaaggacaaggcgctgcgcaag
ctcgaggcgatggcggcgaacctggcacgggtcagcgatctcaccggcgagatccgccgt
cagctcggccctctcgccaagcaggccgacgtcgcccggcgcgcccaggtggtccaggtg
gacctgcgcgatgcccgggccaggctgctcgccgacgacctcgtgcagctgacctcctcc
ctcgcccaggagatcgaggacgagacggcgttgcgccaggagcgggacgccgtcgagaag
gcgcagcaggacgcgcgtgcggaactgacacgactggagggcgaggccgcagccgcggcg
cccgccctgagcgaggcgaccgagatgtggtaccggctctcctcgctgcgcgagcgcctg
cgcggcaccgagaccctggccgccgagcggtgccgcctcctcggagcaccggtggccgcc
gaggagaaccggcgtgaccccgacgacctcgaggcccaggccgcgcgggcacgggaggcc
gaggccgagctcgccaccgaggcgcagcaagcgcgggaggcgctggaggcggcggtcggc
gagcgctcgcgcgccgagcagcgttccgccgaggccgagaaggcgctggccgccgtgcac
cggggcgtcgccgaccggcgtgagggacttgcgcgcctgaccggtcaggtggcggccacc
cgcgggaaggtcgaggccgccgaggccgagctggagcggctgcgccacgacctcgccgca
gcgaccgagcgcgcgcgcgcagccgggcaggagttcgccgcgctcgaacagcaggccgtg
ggtcaggccgagggtgaggaagacctcgatgccgcccatgagcgcgcggtcgaggcgctt
gagcgggcgcaggaggacgtccgcgcgctcaccgagtccgagcgggaggcggacggtgcg
cgcgccaccgcgacggcacgccgcgatgcgctcgctctctccctcacccgcaaggacgcc
accgccacggtgctcgaggcggacggactcatcggggtgctcgggccggtggccgagctg
ctcaccgtggaaccgggatacgaggcggccgtcaccgcggcgctcggaccgctcgccgac
gcggctgcgctggactcggtcgacgccgccgtcgacgccctgcggcacgtccgcgccgag
gacgccggccaggccagactgctgctcgcgcggtcgcacgagtccgagagcgcatccgag
ccggccccggaaccgagcccggcgccgccggccggccggtgggccgtcgaggtggtccgc
ggagccgagtcgatccgcggcgccctggcgctgctgctgcgcgacgtcgtggtggtcgag
gatctggcgagtgcgcgccgggtctgcgccgagtccggccggctcgtggccgtcaccctc
gacggcgacgtgatcggccctgcgcacgcccggggcggcagcaccgccggacccagcgtg
ctggagctgcacgccgcccgggaggaggccgagaagcagatcgccgcggccgccgcgcag
accgagcaggcgcggttcgcgctgggcccggcgcgcgaggccgtcgcctccgcccaggcc
gaggtggaccgtaccctgacggcgctgcacgactccgatgccgagctggcggccgtagcc
gagcgactcggtcagcacgggtcggccatgcgcgcggccaacgccgaggccgagcggatc
gcgccggcgatcgagaaggccgagcacgcccgcaccgagcacgccgaggcgctcgccgag
atcgccgaccggctcgcccgggcccagcaggaaccggtcgagagcgagaacgagctggcc
gcggcgaccgaggagcgcgatcggtggtccgaggccgccaccacggcccgcgcccaggag
accgatgcgcggctggtgctgcgcacggtcgaggagcgcgtccgggccctgagcgggcgc
gcggagtccttggagcgggccgcgaaggcggagcgagaggcgcgcgaggccgccgagcgc
cgcgcccgccgccgcgcggcgcaggcggaggtggcagccaccgtccgggagggtgccacc
cgggccctggccgcgatcgagcattcgctgcagctcgcggccggacgtcgtcagggcgcc
gaggacgaacgcgcccgccgggacgaggcgctgaccgaggtgcgtggccgcctcgacgaa
ctctccgcccgccactcccggctcaccgacgtggtccaccgggacgaggtcgcgcgcgcg
gaacagaaactgcgtatcgatcagctcgagcagcgcgccgtggacgagctgggcctcgat
cccgaggtgctggtcgcggagtacggccccgaccagctcgtcccaccggtgcccgcgccg
gggcaggaggccgccgaggagcccaggccgtacgtgcgggccgagcaggagaagcggctg
cgagccgccgaacgggcgctcacgctgctcggcaaggtgaacccgctggcactggaggag
cacgcggcgctggaggagcgccacaagttcctcaccgaccagttggccgacctgaagaag
tcccgagccgacctgctcgacatcgtcgcccagatcgacgcccgggtcgaggaggtcttc
acctccgcctacgccgacaccgccgcccagttcgagcaggtcttctcccgactcttcccc
ggcggcgagggtcgactggtcctcaccgaacccggcgacatgctgaccaccggcatcgag
gtcgaggcccggccgcccggtaagaaggtgaagcggctctcgctgctctccggcggcgaa
cgatcgctgaccgctgtggcgctgctggtcgcgatcttcaaggcgcggccgagtccgttc
tacgtcatggacgaggtggaggcggcgctcgacgacgtcaacctcggccggttgctggag
atcttccgcgagctgcgctcggactcccagctcatcgtggtcacgcaccagaagcgtacg
atggagatcgcggacgcgctctacggcgtcacgatgcgaggcgacggcgtcaccaccctc
atcagccagcgcctcgccgagcgtgaggacgccggctga
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