Ruania suaedae: LQF12_06235
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Entry
LQF12_06235 CDS
T08275
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rsua
Ruania suaedae
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsua03016
]
LQF12_06235 (truB)
Enzymes [BR:
rsua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LQF12_06235 (truB)
Transfer RNA biogenesis [BR:
rsua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LQF12_06235 (truB)
Prokaryotic type
LQF12_06235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UFU04177
LinkDB
All DBs
Position
1358370..1359266
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AA seq
298 aa
AA seq
DB search
MSDGIVLIDKPPGWTSHDVVARSRRVLGTRKVGHAGTLDPMATGLLVLGVNRATRLLTYL
VGADKEYLTTIRLGQDTLTDDAEGEVTRTSGIGSEGGRDVHDRLEASIATLRGPIEQVPS
SVSAIKVDGKRSYARVRGGEEVTLAARPVTVHTFEVLAIHPARTEDGIEVLDVEARVECT
SGTYVRALARDLGRALGTGGHLRALRRTRVGDFAVADAQPLTRETAQLRMLDVATVLRAA
FPVRELTDEETRELRFGRRLAATGTGEVTAALAPDGRGIALVQDDGGRARPVLVLDPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggcatcgtcctgatcgacaagccgccgggctggaccagccacgatgtggtc
gcccggtcacgacgcgtgctgggcacccgcaaggtgggccatgcgggcaccttggacccg
atggccaccggcctgctcgtcctcggtgtcaaccgggccacccggctgctgacgtatctg
gtgggtgccgacaaggagtacctcaccacgatccggctcgggcaggacacgctcaccgac
gacgccgagggcgaggtgacgcgcacatccgggatcggcagcgagggcggtcgcgacgtc
catgatcgtctcgaggcgtcgatcgcgacgctacgcgggccgatcgagcaggtcccgagc
tcggtcagtgccatcaaggtggacggcaagcgttcctacgcccgcgtgcgcggcggggag
gaggtcaccctcgcggcccgcccggtcaccgtgcacaccttcgaggtgctggcgatccac
cccgcgcggaccgaggacggcatcgaggtgctcgacgtcgaggcgcgcgtggagtgcacc
tccggcacctacgtccgtgcccttgcccgtgacctcggtcgggccctcggcaccggcggg
catctgcgcgcgctgcgccgcacccgcgtcggtgacttcgccgtcgccgacgcacagccg
ctgactcgcgagaccgcgcagctgcggatgctggacgtggccacggtgctccgggcggcc
ttccccgtgcgcgagctcaccgacgaggagacccgcgagctccgcttcggccggcgcctc
gcagcgaccggtaccggtgaggtgacggccgcgctcgcaccggacggccgggggatcgcg
ctggtgcaggacgacggcggccgggcgcgtccggtcctcgtgctcgaccccgcgtga
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