Ruania suaedae: LQF12_06330 Help Entry LQF12_06330       CDS       T08275                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism rsua  Ruania suaedae Brite KEGG Orthology (KO) [BR:rsua00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rsua03400]     LQF12_06330 Enzymes [BR:rsua01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      LQF12_06330     5.6.2.6  RNA 3'-5' helicase      LQF12_06330 DNA repair and recombination proteins [BR:rsua03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     LQF12_06330 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII AbiEi_4 DUF6406 AAA_25 PhoH AAA_22 Helicase_C_3 NAD_binding_3 Motif Other DBs NCBI-ProteinID:  UFU04193 LinkDB All DBs Position complement(1377995..1382788) Genome browser AA seq 1597 aa AA seqDB search MPRTSDAGPPGDALTAFSDATRRWFTSAFEAPTTAQSGAWEAVASGQHALVIAPTGSGKT LAAFLWAVDQLLTGTQPAERSRRCRVLYVSPLKALAADVERNLRSPLVGITQTATAQGAS VNDVQVGVRTGDTPASERRRFSTHPPDICITTPESLFLMLTSSAREGLRGVEAVIIDEVH ALAGNKRGAHLAISLERLDALLERPAQRIGLSATVRPPESVAAYLAGSRSLDEGGRSTRI VQPHVDKELQIDVVVPVPDLSDLSSAASGPGSGADLSGDAAGMVPEGKTPSGSSIWPHVT ERVVDLITSHTSTIVFTNSRRGAERLAARINEHYAERLGLGSELDEGSAWAAELPAQSGT ALPQPDHLPADAIIARPHHGSMSREERTATETALKNGTLPAVVATSSLELGIDMGAVDLV VQVGAPPSVASALQRIGRAGHQVGALSRGVVLPTHRGDLLAAATTSARARDGAIEEVHVP ANPLDVLAQQIVAMCAQEVWTVEELAALMRRSVPLTHLSDRVLTAVLDMLAGRYPSEEFA DLRPRLTWDRVAGTLTGRPGTLLLAATSGGTIPDRGLYGVYVVGQDASARGGKRVGELDE EMVYESRTGDTFTLGSSTWRIEDITPDRVLVSPAPGLPGRLPFWKGDRPGRPAELGRAIG AMVREVADRGITPEAVQDWGLDAWAQENLLTYLREQQSATGRLSTDRSIVVERFRDELGD WRVVIHSPYGAEVHAPWALILSARLRERFGMDVAAMHADDGIVLRLPDTDATWSLTGSGP ADDPYGPVRADTQGLADPPGASAAAEVTLEDLLLDPDELRAQALAALSGSAHFAARFREA AARSLLLPARRPDRRQPLWQQRQRSAQLLSVAAGHADFPVVLEAVRECLQDDYDIDALAA LMREIRARDVQVVEVSTPSPSPFAQSLLFGYVAQFLYGEDTPLAERRAAALTLDASLLSD LLGEGAEIADLLDPQALRSVEDEVGWRTESARARDREGLLDLVRRLGPVTEDDLAARCTE PASVADWLSALQGERRVLPVRVAGESRWIVVEDAGRIRDALGVPLPTGLPEALTEPVPRA LEDLVRRFARSHGPFRAGELAHWLGLGPGALTATVTELVRAGALTSGALRPPGAQTAAGA SMPGPDYCDADVLRRIRRRSLAALRAEVEAVPPARLGVFLPRWHQVQALRGTDGVLTAID QLAGTPVAASAWESLVLPARVSDYTPEMLDELTTAGEVVWVGAGSGPGNDGLVALLPADA VADLAPAGELAVETPVHRALLDILGRGGGLFYRDLVTTLREEWQEEVPPTSEAVLAALWE CLWAGSVTNDSLAPLRARLGARPRPGAGSARRARPRARPRGRSLRALHSGPPVPETGVGR WSRVGARSDGSRRATMAAIALLDRDGLVTRGSAALAVPGGFGTAYRAFASLEESGQVRRG YFVEGLGAAQFAVPDAVERLRGTGAGASSPALLLAATDPANPYGAALSWPDPVGMTGEGT AHRPGRKVGASVILCDGEPVLYLERGARSVLSFSTEPVRLEAAAAELVRRAQSGGLGRFT VTRLDGVPALSSDAPLAQALLEAGFLATPSGLRIRRR NT seq 4794 nt NT seq  +upstreamnt  +downstreamnt gtgccccgaacctccgacgccggcccacctggcgatgcgctgaccgcattcagcgacgcc acccgtcgctggttcacgagtgcgttcgaggccccgaccaccgcgcagtcgggcgcctgg gaggccgtggcctccggccagcacgctctggtcatcgcgccgacgggctcaggaaagaca ctggctgccttcctctgggcggtggaccaactgctcaccggcacccagcccgccgagcgc tctcgacgctgccgcgtcctctacgtctcgccactcaaggccctcgccgccgacgtcgag cgcaacctgcgctcgccgctggtggggatcacccagaccgcgacggcgcagggcgcctcg gtcaacgacgtccaggtcggcgtccgcaccggcgacaccccagcctccgaacgccgcaga ttctccacccacccaccggacatctgcatcacgacccccgagtcactgttcctcatgctg acctcctccgcccgcgagggactacgcggtgtggaggccgtgatcatcgacgaggtgcat gccctggccgggaacaagcgcggcgcccacctggcgatctcgctcgagcgcctggacgct ctgctcgagcggcctgcccagcgcatcggcctctcggcgaccgtgcgcccgccggaatcg gtggccgcctatctcgccgggagccgcagcctggacgaaggcggccgctccacccgcatc gtccagccccacgtggacaaagaactccagatcgatgtcgtcgtccccgtcccggacctc tccgatctgagttcagcggcctccggtcccggctcaggcgcggatctcagcggcgacgca gccggcatggtgcccgagggcaagaccccgtccggcagctcgatctggccccacgtcacc gaacgcgtggtcgacctgatcaccagccacacctccaccatcgtgttcaccaactcgcgg cgcggcgccgaacgcctggccgcccggatcaacgagcactacgccgagcggctcgggctc ggctccgagctcgacgagggatcggcctgggccgccgagctccccgcacagtcgggcacc gcgcttccgcagccggaccaccttcccgccgacgccatcatcgcgcgcccccaccacgga tcgatgagccgcgaggaacgcaccgcgaccgagactgcgctcaagaacggcaccctgccg gctgtcgtcgccaccagctcgctcgagctgggcatcgacatgggcgccgtggacctcgtc gtccaggtcggagcaccgccgtcggtggcgagcgcgctgcaacgcatcggacgcgccggt caccaggtcggcgccctctcccgcggcgtcgtcctgcccacgcatcgcggtgacctgctc gccgcggccaccacctccgcgcgggctcgtgacggcgcgatcgaggaggtgcacgtcccg gcgaatccgctcgacgtgctcgcgcagcagatcgtggcgatgtgcgcgcaggaggtgtgg accgtcgaggagctcgccgcgctcatgcgccgctccgtacccctgacccacctgagcgac cgtgtgctcaccgccgtgctggacatgctcgccgggcgctacccgagcgaggagttcgcc gatctacgcccccgcctgacctgggaccgggtggccggcaccctcaccgggcgccccggc acgctgctgctggccgccaccagcggcggcaccatccccgaccgtggcctgtacggagtc tatgtcgtcgggcaggatgcgagcgcacgcggcggtaagcgcgtgggcgaactcgacgag gagatggtctacgagtcgcgcaccggcgacaccttcaccctcggctcctccacctggcgc atcgaggacatcacgcccgatcgggtgctcgtctcccccgcaccgggtctacccggccga ctgccgttctggaagggcgaccgacccgggcggccggctgagctcggtcgcgcgatcggt gccatggtgcgcgaggtcgccgaccgcgggatcacccccgaggccgtccaggactggggc ctggacgcgtgggcgcaggagaacctgctcacctacctgcgtgagcagcagagtgccacc ggccggttgagcaccgaccgctcgatcgtggtcgagcgcttccgcgacgagctcggggac tggcgggtggtcatccactccccctacggcgcggaggtccacgcgccctgggcgctgatc ctctccgcccggctgcgggaacgcttcggcatggacgtggccgcgatgcacgccgacgac ggcatcgtgctcaggctcccggacaccgacgccacctggtcgctgaccgggtccgggccg gcggacgacccctacggtcccgtgcgagcggacacgcagggcctcgcggacccgccggga gcctcggcggccgccgaggtcacgctggaggacctgctgctcgacccggacgagctgcgc gctcaggcgctggccgcgctctccgggagcgcccacttcgcggctcggttccgcgaggct gcagcacgctccctgctgctgccggcccgccgaccggaccgccgccagccgctctggcaa cagcgccagcgcagtgcccagctgctctcggtggccgccggccatgccgacttcccggtc gtgctggaggcggtgcgggagtgcctgcaggatgactacgacatcgacgccctggccgcg ctgatgcgggagatccgggccagggacgtgcaggtggtggaggtcagcaccccctccccg tccccgttcgcccagtcgctgctgttcggctacgtcgcgcagttcctctacggcgaggac acgccgctggccgaacggcgggcagcagccctcaccctggacgcctcactgctctccgac ctgctgggcgaaggcgccgagatcgccgacctgctggatccgcaggcgctgcgctcggtg gaggacgaggtcggctggcgcacggagtccgcccgggcccgggaccgggagggactgctg gacctggtgcgacgcctcggcccggtgaccgaggacgacctggccgcgcgatgcaccgaa cctgcctcggtggcggactggctctcggccctgcagggcgagcgccgggtgctcccggtg cgggtagccggtgagagccggtggatcgtcgtggaggacgccgggcgcatccgcgacgcc ctcggggtccccctgccgacgggcctacccgaggcgctcaccgaacccgtcccgcgcgcg ctcgaggatctcgtgcggcgattcgcccgatcccacggcccgttccgcgccggtgagctc gcacactggctcgggctgggacccggcgcgctcaccgccaccgtcaccgagctcgtgcgt gcgggggcgctgaccagcggggctctacgtccaccgggggcccagacggcggccggagcc tcgatgcctgggccggactactgcgacgccgacgtgctgcggcggatccggcgccgcagt ctggccgccctccgcgcggaggtggaagccgtacccccggcgcggttgggagtcttcctc ccccgctggcaccaggtgcaggcactgcgcggcaccgacggcgtcctcaccgccatcgac cagctcgccggcacgccggtggccgcctcggcgtgggaatcgctcgtgctgcccgcccgg gtcagcgactacacgccggagatgctcgatgaactgaccaccgccggcgaggtggtctgg gtgggcgccggctccggcccgggcaacgacggactcgtcgcgctgctcccggccgacgcg gtcgccgacctcgccccggccggtgaactggcggtcgagacgccggtgcaccgcgcactg ctggacatcctcggccgaggtggtggtctgttctaccgcgacctggtcacgaccctgcgc gaggagtggcaggaggaggttccaccgacgtcggaggccgtgctcgcggccctgtgggag tgcctgtgggctggcagcgtcaccaacgacagcctcgcgccgctgcgcgcgcgcctgggt gcacggccgcgcccgggcgcaggctcggcccggcgcgcccgccctcgagcccgcccgcgg ggccgctccctgcgtgccctgcacagtggcccgccggtccctgagaccggcgtgggccgg tggtcccgggtgggcgcacggtccgatgggtcacgccgcgccacgatggcggccatcgcc ttgctcgaccgcgacggcctggtcacccgcggcagcgccgcactcgccgtccccggtggc ttcggcaccgcctaccgggcgttcgcctcgctcgaggagagcgggcaggtgcggcggggg tacttcgtcgaaggtctcggagcggctcagttcgccgtcccggatgccgtggagcgcctc cgcggcacaggcgcaggcgcgtcgagtccggcgctgctcctggccgcgacggatccggcg aacccctacggcgccgcgctctcttggccggacccggtcggcatgaccggcgagggcact gcgcaccggcccgggcgcaaggtcggggccagcgtgatcctctgcgacggcgagccggtg ctctacctcgaacggggagcgcgctcggtgctcagcttcagcaccgagcctgtccggctg gaagccgccgcggccgagctcgtgcgccgggcccagtccggcgggctgggccggttcacg gtgacgcggctcgacggcgtcccggccctgagctcggacgcgcctctcgcccaggcactg ctcgaggccgggttcctcgccaccccgagcggcctgcggatccgccggaggtga

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