Ruania suaedae: LQF12_06525
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Entry
LQF12_06525 CDS
T08275
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rsua
Ruania suaedae
Pathway
rsua00470
D-Amino acid metabolism
rsua00550
Peptidoglycan biosynthesis
rsua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQF12_06525 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQF12_06525 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsua01011
]
LQF12_06525 (murD)
Enzymes [BR:
rsua01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LQF12_06525 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rsua01011
]
Precursor biosynthesis
Amino acid ligase
LQF12_06525 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
AlaDh_PNT_C
AdoHcyase_NAD
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UFU04230
LinkDB
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Position
1423623..1425083
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AA seq
486 aa
AA seq
DB search
MIDALRGRDVLVAGLGVSGRAAVEALVEVGARVTAVDADPARADGVPPGVRVLTGSPAMV
TEGMAAHPPELVVASPGWRPSSPVLRAASEHRVPVWSEVELAWQMCAPDVRWLTITGTNG
KTTTVGMLEQMLLARGWRAQAVGNVGTPITTTVLAARAGGDPIDALAVELSSFQLHYTHS
LSPVASVCLNIDADHLDWHGSMDAYAGAKARVYSRTRRACVYNAADPRTRQMVEEADVIE
GARAVGFTLGMPAIGQVGMVEDLLADRAFAPDRQTHAAELATLEDLRHLGGAASPGSTLE
VAPHIVANALAAAALARAAGVEPEAIGAGLRAYRPGAHRMSEVAEVGGVRYVDDSKATNA
HAAAAALAAMEPGRTIWIAGGLAKGAELGGLVAAHADRLRAVVVIGRDPEPVAGALRRHA
PDIPRLVVPAGETDVMETAVEAARGLAHPGDVVLLAPACASMDQFDSYAARGDAFAAAVR
SLEERS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgctgcgcggccgggacgtgctcgtggccggcctgggggtctccggccga
gcggccgtggaggcgttggtcgaggtcggagcccgcgtcaccgccgtcgacgccgacccg
gcccgtgccgacggcgtgccgcccggcgtgcgggtcctcaccgggtcaccggcgatggtg
accgagggcatggccgcgcaccctcccgagctcgtcgtcgcctcgcccgggtggcgcccg
tcctcgccggtgctgcgcgccgcgtccgagcaccgggtcccggtgtggagcgaggtcgag
ctcgcttggcagatgtgcgccccggacgtgcggtggctgacgatcaccgggacgaacggc
aagaccaccaccgtcggcatgctggagcagatgctcctcgcccgcggctggcgcgcccag
gcggtgggcaacgtcggcaccccgatcacgacgacggtgctggcagcccgggccggtggg
gacccgatcgatgccctcgcggtagagctgtccagcttccagctgcactacacccactcg
ctctccccggtggcgtcggtctgcctgaacatcgacgccgaccacctcgactggcacgga
tccatggatgcctacgccggggcgaaggcacgcgtgtactcccgcacccggagggcgtgc
gtgtacaacgcggccgatccgcgcacccggcagatggtcgaggaggcggacgtgatcgag
ggagcacgcgccgtcgggttcaccctcggcatgcccgcgatcggccaggtgggcatggtc
gaggacctgctcgccgaccgtgccttcgctcccgaccggcagacccacgcggccgagctc
gccacgctcgaggacctgagacatctcggcggtgcagcgagccccggcagcaccctcgag
gtggcgccgcacatcgtggccaacgcgctcgccgccgccgctctcgcccgtgcggccgga
gtcgagccggaggcgatcggcgccggtctgcgggcctaccggcccggggcgcaccggatg
agcgaggtcgccgaggtcggcggggtgcgctacgtggacgactccaaggccaccaacgcc
cacgccgccgcggctgcgctggcggcgatggagccgggccggaccatctggatcgcgggg
ggcctggccaagggggccgagctggggggcctggtggccgcccacgccgacaggctgcgt
gccgtcgtggtgatcggccgcgatcccgagccggtcgcgggtgcgctacgacgacacgcg
cccgacatcccacgcctggtggtccccgctggtgagactgacgtcatggaaacggcggtc
gaggcggcgcggggcctggcgcacccgggcgatgtggtgctgctcgccccggcgtgcgca
tcgatggatcagttcgactcctacgccgcgcgcggtgacgccttcgcggcagcggtccgc
tccctggaggagcgctcgtga
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