Ruania suaedae: LQF12_07060
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Entry
LQF12_07060 CDS
T08275
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rsua
Ruania suaedae
Pathway
rsua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LQF12_07060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsua02000
]
LQF12_07060
Transporters [BR:
rsua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LQF12_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
DUF2710
AAA_29
AAA_23
AAA_22
AAA_15
EMP70
Motif
Other DBs
NCBI-ProteinID:
UFU04331
LinkDB
All DBs
Position
1528396..1530126
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AA seq
576 aa
AA seq
DB search
MLGLLRASLTPYRWSLLIVCVLQLVQTLAALYLPSLNARIIDEGVVAGNTDLIWRTGAVM
LAVSAVQVLTSVVAVYVGARTAMSLGRDLREDLFTRVMRFSAQEMSTLGTPSLITRSTND
VQQVQMFVFMALTAIIMAPIMLVGGVAMAVREDAGLSLLLVAVVPALGGTMGIVATRMVP
YFRTMQKRIDTVNGILREQITGMRVVRAFVKEAEEATRFGVANADLREVAVRVGRLMAFA
LPMVMLIVNLASVAVIWFGGRRVDAGVTEIGSLVAFLSYLMFVLFAVMMATMMFMFAPRA
AVSSERILEVLDSEPTVHPPADPQRPEVVSGMVEMTGVTFRYPGAEKDVLHQIDLQAQPG
TTTAIIGSTGAGKTTVLALVPRLFDATSGSVRIDGVDVRDLDPALLSQIIGLVPQRPYLF
SGTVASNLRYGRADATEEELWEALRVAQAENFVRSMDGGLEARIAQGGTNVSGGQRQRLA
IARALIRRPAIYLFDDSFSALDYATDAALRAALRPRTRRSSVIVVAQRVATIRDADQILV
LEHGRLVGRGTHAELLATNETYQEIVSSQLSAEEAA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggccttctgcgtgcgtcgctgaccccctaccgctggtcgctgctgatcgtctgc
gtgctgcagctggtacagacgctggccgcgctgtacctgcccagtctgaacgcccggatc
atcgacgagggcgtcgtggcgggcaacaccgacctgatctggcggaccggcgccgtcatg
ctcgcggtcagcgccgtgcaggtgctcaccagtgtggtggcggtctatgtcggtgcccgg
acggcgatgtccctgggccgggatctgcgcgaggacctgttcacgcgggtgatgcgcttc
tccgcccaggagatgtcgaccctgggcaccccctcgctgatcacccggtcgacgaacgat
gtgcagcaggtgcagatgttcgtcttcatggcgctgacggcgatcatcatggccccgatc
atgctggtcggtggcgtcgcgatggcggtgcgtgaggatgccgggctctcgttgctgctg
gtggcggtggtcccggccctcggcgggacgatgggaatcgtggccacgcggatggtgccg
tacttccgcaccatgcagaagcgcatcgacaccgtcaacgggatcctgcgtgagcagatc
accggcatgcgggtggtgcgggccttcgtcaaggaggccgaggaggccacccggttcggg
gtggccaacgccgacctgcgcgaggtggcggtgcgcgtgggccgactgatggcgttcgcg
ctgccgatggtgatgctcatcgtcaacctcgcctccgtggcggtgatctggttcggagga
cggcgtgtcgatgccggggtgaccgagatcgggtcgctggtggcgttcctgtcctacctg
atgttcgtcctgttcgcggtgatgatggcgacgatgatgttcatgttcgccccccgcgcg
gcggtctcctccgagcggatcctggaggtgctggactccgagccgaccgtgcacccgccg
gcggatccgcagcggccggaggtggtcagcgggatggtggagatgaccggggtgaccttc
cgctaccccggggcggagaaggacgtactccaccagatcgacctgcaggcgcagccgggc
acgacgaccgcgatcatcggatccaccggtgccggcaagaccacggtgctggccctcgtg
ccccggctcttcgacgccacctccggatcggtgcgcatcgacggggtggacgtgcgcgat
ctcgatcccgcgctcctctcccagatcatcgggctggtgccccagcggccctacctgttc
agcggcaccgtcgcctcgaacctgcgctacggccgcgccgacgccaccgaggaggagctc
tgggaggccctgcgggtggcgcaggccgagaacttcgtgcggtcgatggacggcggactg
gaggcgaggatcgcccagggcggcaccaatgtctccggtggccagcgccagcggctcgcg
atcgcccgggcactgatacgccggcccgccatctacctgttcgacgactccttctccgcc
ctggactacgccaccgatgccgccctgcgggccgccctgcggccgaggacgcgacgctcg
agcgtgatcgtggtggcgcagcgggtggcgacgatccgtgacgccgaccagatcctggtg
ctcgagcacggacggctggtgggccggggcacccacgccgagctgctggccaccaacgag
acctaccaggagatcgtctcctcgcagctgagcgccgaggaggcggcatga
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