Ruania suaedae: LQF12_08755
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Entry
LQF12_08755 CDS
T08275
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rsua
Ruania suaedae
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsua03032
]
LQF12_08755
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_08755
Enzymes [BR:
rsua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQF12_08755
DNA replication proteins [BR:
rsua03032
]
Prokaryotic type
DNA Topoisomerases
LQF12_08755
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQF12_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
UFU01618
LinkDB
All DBs
Position
1889060..1891531
Genome browser
AA seq
823 aa
AA seq
DB search
MARHSAPGSQQHPVDSTIIDTDVSAEMRGSFLEYAYSVIYSRALPDARDGLKPVQRRILF
QMAQMGLRPDRGHVKSARVVGDVMGKLHPHGDGAIYDALVRMAQSFSLRLPMVDGHGNFG
SLDDGPAAPRYTEARLAPAAIAMTADLGEDVVDFVPNYDNQLTQPEVLPAAIPNLLVNGA
SGIAVGMATNMPPHNLVEVVAAARHLIAHPDADLEALMRFVPGPDLPGGGKIVGLDGIRE
AYAGGRGSFRTRATVRVENVTARKKGIVVTELPYQVGPERVIEKIKDAVQAKKLQGIAAV
NDLTDRTNGMRLLIEIKNAFNPEAVLAQLYRLTPLEESFGINNVALVEGQPRTLGLRELL
QVYVAHRLEVVRRRTEHRLGKRTERAHLVEGLLVAIADIDEVIAVIRSSDDAESARTRLM
GVFDLSEAQAEYILELRLRRLTKFSRIELEAERDELAREIAELRAILADEALLRGLVSDE
LAEVAAAHGTPRRTVLLESSGATATAEAAPARRGRAAGDVPLEVADTPCRVLLSATGLLA
RTADDTDPARTGSRSAHDALHASVSGTARGEVGAITNRGRMLRLPVIEVPALPPTDAAPS
LSGGVPVSEVLMLEPGERVLGLASLAEGAPPIALGTRSGLVKRVAGDHPRRDSWEVIGLK
DGDEVVGAACAAEEDELVFISSHAQLLHFPAALVRPQGRPAGGMAGIRLAETDSVLAFTV
VPAARAESAVLVTLAGSSGALPGTVPGSAKVTPFTLYPGKGRATGGVRAHRFVRGEDSLL
LAAVGPDPVRAVGSAGQPVELPELDERRDGSGSALEAPVAGLG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcactccgcacccggctcgcagcagcatccggtggattccacgatcatcgac
accgacgtctccgccgagatgcgtgggtcgttcctggagtacgcgtactccgtcatctac
tcgcgggcgttgccggacgcccgggacggtctcaagcccgtccagcgccgcatcctgttc
cagatggcgcagatgggcctgcgcccggaccgcggccacgtgaagtcggcccgcgtcgtc
ggcgacgtcatgggcaagctgcacccgcacggggacggcgccatctacgacgccctcgtc
cggatggcgcagtcgttctcgctgcgtctgccgatggtcgacgggcatggcaacttcggt
tccctcgacgacggtccggccgcgccgcgctacaccgaggcccggctggctcccgccgcg
atagccatgacggcggatctgggcgaggacgtcgtcgacttcgtgcccaactacgacaac
cagctcacccagccggaggtcctcccggcggcgatccccaacctgctggtcaatggcgcc
tccggcatcgcggtgggaatggcgacgaacatgccaccgcacaacctggtcgaggtggtc
gcggcggcccggcatctcatcgcccacccggatgcggacctggaggcgctgatgcgcttc
gtgcccgggcccgaccttcccgggggcggcaagatcgtcggtctggacgggatccgggag
gcctacgccggcgggcgtggttcgttccgcacgcgggccaccgtccgggtcgagaacgtc
accgcccgcaagaagggcatcgtggtcaccgagctgccctaccaggtcggaccggagcgg
gtgatcgagaagatcaaggatgcggtgcaggcgaagaagctgcagggcatcgccgcggtc
aacgacctcaccgaccgcacgaacggcatgcgcctgctgatcgagatcaagaacgccttc
aaccccgaggccgtcctggcccagctctaccggctgacaccgctggaggagtccttcggt
atcaacaacgtcgccctggtcgagggccaaccacgcacgctgggcctgcgcgaactgctg
caggtctacgtcgcccaccggctcgaggtcgtgcgccggcgcaccgagcaccgcctgggc
aagcgcaccgagcgggcgcatctggtcgagggtctcctggtggccatcgccgacatcgac
gaggtgatcgcggtcatccgcagcagcgatgacgccgagtccgcgcggacccggctgatg
ggtgtcttcgacctgtccgaagcccaggcggagtacatcctggagttgcggttgcgccgg
ctcacgaagttctcccggatcgagctggaggccgagcgggacgagctcgcccgggagatc
gccgagctgcgcgccatcctcgccgacgaggcgctcctgcgcgggctcgtctcggacgag
ctcgccgaggtggccgctgcccacggcacgccgcgccggaccgttctgctcgagtcctcg
ggagccaccgcgacggccgaggccgcaccggcgcggcgcggccgggcggccggcgacgtg
ccgctcgaggtcgccgacaccccctgccgcgtgctcctctcggcgaccggtctgctcgcc
cgcaccgccgacgacaccgaccccgcccgcaccggctcgcgtagcgcgcacgacgcgctg
cacgcgtccgtgagcggcaccgcgcgaggagaggtcggggcgatcaccaaccgcggccgg
atgctcagactcccggtcatcgaggtacccgcactgcccccgaccgacgccgcaccgagc
ctgtccggtggcgtgccggtgagcgaggtgctcatgctcgaacccggggagcgggtgctc
ggcctcgcgagcctggccgagggcgcaccgccgatcgccctgggcacgcgctccggtctg
gtcaagcgggtcgccggggaccacccccgtcgcgacagctgggaggtcatcggcctcaag
gacggggacgaggtggtgggtgcggcgtgcgccgccgaggaggacgagctggtcttcatc
tcctcccacgcacagctgttgcactttcccgccgccctcgtgcgcccgcaggggcggccc
gccggtgggatggcgggtatcaggctggccgagacggactcggtgctggccttcaccgtg
gtgccggccgcgcgggcggagagcgcggtgctcgtgaccctggccggtagctccggcgcc
ctgccgggcacggtgcccggttcggccaaggtgacgcccttcacgctctaccccggcaag
gggcgcgcgacgggcggggtccgtgcacaccggttcgtccgcggggaggactcactgctg
ctggccgcggtcggccccgatccggtccgggcggtcgggtcggccggtcagcccgtcgag
ctccctgagctcgacgagcgacgggacggctccgggagcgcgctcgaggcaccggtggcg
ggactgggctga
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