Ruania suaedae: LQF12_08815
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Entry
LQF12_08815 CDS
T08275
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
rsua
Ruania suaedae
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Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
SLT
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
SLT_4
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UFU01630
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Position
1902535..1904115
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AA seq
526 aa
AA seq
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MTRTTTRRSTRRPSAFATLGALGAATAVGLGATAVPAAAAPQPAPSPVRGEILRSVAPQL
APVTAHTPARRAETLYTVRAGDTVSHLALRYGTSVRAIVDANDLGRRAIIRIGQTLRIPG
SSSSGSSSSGSNSSGSGSSSSGSSSSSSAKTHRVVAGDTVSALAARHGTTVRAIISANGL
NSNALIRIGQTLRIPGSSSSGSSSGSGSSSSGSSSSSNNSGSSSSSSGNSSSSSAKTHRV
VAGDTVSALAARHGTTVRAIISANGLNSNALIRIGQTLRIPGSSSSGSSSSGSSNSGSSS
NNSGSNNSGSSSGSQSSVVHRVISGDTVSSIATQYGSSVSAIMEANNLASAGVIRVGQRL
QVPSGLVSNTFLHYTYGSDVTAAANANKRTLLATSVPSREQMQQMIRSTATRMGVDPALA
LAVAYQESGFNMRAVSPANAIGVMQVIPTSGEWASTLVGRQLNLLDPQDNVTAGVAILRT
LHRMTDDEREAIGGYYQGLGSVQRNGLYDDTRRYVANIQTLMTRYS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaccaccacccgccgctccacacgccgcccgtcggcgttcgcgactctcggc
gcactgggcgcggccacggccgtggggctcggcgcgaccgcagtgcccgccgctgcggcg
ccgcagcccgcgccgtcaccggtgcgcggcgagatcctgcgctccgtcgcaccgcagctc
gctccagtcacggcgcacacgccggcccggcgcgccgagacgctctacacggtgcgcgcg
ggtgacaccgtcagccatctcgcgctgcggtacggcacctcggtgcgggcgatcgtcgac
gccaacgacctcgggcgccgcgccatcatccggatcggccagacgctgcgcatccccgga
tccagcagctccggctcgagcagttcggggtcgaacagttccggctccggcagctccagc
tcgggcagttcgagctcgagcagcgccaagacccaccgcgtggtcgccggtgacaccgtc
tcggccctcgccgcccgccacggcaccaccgtgcgcgccatcatcagcgccaacggcctc
aactccaacgccctgatccgcatcggccagaccctgcgcatccccggatccagcagctcc
ggctcgagctcgggctccggctccagcagctccggctcgagctcgagctcgaacaactcc
ggatccagcagctccagctccggcaactcgagctccagcagcgccaagacccaccgcgtg
gtcgccggtgacaccgtctcggccctcgccgcccgccacggcaccaccgtgcgcgccatc
atcagcgccaacggcctcaactccaacgccctgatccgcatcggccagaccctgcgcatc
cccggatccagcagctcgggctcgagcagttcggggtcgagcaactccggctcgagctcg
aacaactccggctcgaacaactccggctcctcgagcggttcccagtcgagcgtcgtccac
cgcgtcatcagcggcgacacggtctcgagcatcgccacccagtacggctcctccgtcagc
gcgatcatggaggcgaacaacctggcgtccgcgggtgtgatccgggtcggtcagcgcctg
caggtgccctcgggtctggtctcgaacacgttcctgcactacacctacggttccgatgtc
acggccgccgccaacgcgaacaagcgcacgctgctggcgacctcggtgcccagccgcgag
cagatgcagcagatgatccgctccaccgccacccggatgggtgtcgacccggcactcgcg
ctcgccgtcgcctaccaggagtcgggcttcaacatgcgcgcggtctcgcccgcgaatgcg
atcggcgtcatgcaggtcatccccacctcgggcgagtgggcctccaccctcgtcggccgg
cagctcaacctgctcgacccgcaggacaacgtcaccgcgggcgtggccatcctgcgcacc
ctgcaccgcatgaccgacgacgagcgcgaagccatcggtggctactaccagggcctcggc
tcggtccagcgcaacggcctctacgacgacacccggcggtacgtggccaacatccagacg
ctgatgacacgctactcctga
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