Ruania suaedae: LQF12_09400
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Entry
LQF12_09400 CDS
T08275
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
rsua
Ruania suaedae
Pathway
rsua02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQF12_09400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
fn3
Cadherin_4
Cadherin_5
SusE
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-ProteinID:
UFU01738
LinkDB
All DBs
Position
complement(2026642..2032680)
Genome browser
AA seq
2012 aa
AA seq
DB search
MASATVLSLVLGTVVALSLNYEGVATADVDLNDGGVWVSNNESILVGRLNFPVGEIDAAL
AALSQDVDLLQREDVVFIRDRAGQTLQRVDPVSVAVRGSAVPLPTGSDVQLGDNTVGVLV
EETGEWRVLGLDGLDVLTESTEEPQAVLGEDAAQAIADDGTAYGLDTDTGQLLTFGPGQR
TDPVTTELDPSVFDGAATQLSVVGSEPVALAFDAETEDLTLVRPDQDPVDLTGLEVDGAS
ARLQAPSRGGNVVAIATSDALITVPLDGSEPRVTRSPSAGQPAQPVQVAGCVHSAWAALP
AGYLRQCGDQAAESLEVPSATGGELVFRVNRSYVVLNELATGNSWMVEDALVLVDNWETS
IPPTEEDETEEEESQDLEQREVELDREAENRPPVAVPDSFGVRAGRIAVLPVLHNDSDAD
GDLLTAAPEGQIPESFGQLETVLGGRALQVRVAPGASGITSFQYVADDGRGGTDTATVDL
EVIPEGQNSPPEQLTEITAEIASGQSAEVNVLNDVLDPDGDAVYVTRTLEDAGLQVQSDP
NGLISIVDPGVPTGQRQVRLEVSDGAATAEVLIDVEILPAAAQPPTAVFDYATAFVDETI
EIDPIANDLDPNDRPLRLANVQSADGAEIRQSTSSNTFSFTASSPGDYYVVYVVADDDGL
SATGLVRVSVRAPENLDPVAATDTAYLPPDGTVLVDVLANDEDPAGGVLAVQQIDVPEGY
GLRVSILEHRVLRITSDRTLQTPVTIDYTVSNGTRTGEGEVLVLPLDAETGTRAPIAVPD
EVRVRAGDHVTIPVLSNDSHPNGFDFSLDPTIAEEPAGGVMFTAGDVVRFQAPDEAGTLT
AVYRIVDEYGREDSATIRIYVQARADGANGAPEPRDVETRAFSGERIRIPIETYGIDPDG
DSVQLLGVDSPPALGRVVEVGATYIDYQAFTDSAGTDEFTYSVRDRLGAIASAEVTVGVI
PPPSVNRPPVVVDDEITVPPGRPISVDVLANDTDPDGDQLAFDDPAFSEHPGTDPEVRDG
KVALISPESTGDHLITYHVSDLHGGTASGLLTVTVDPDSPLQPPVAVDDVVPPAAILDRE
VITVDVLENDSDPDGSVEALTVDIPDGQESATSPDGKGVQITLTPTRQVVTYRITDSDDL
VSYAFIEVPGTEDTGPVLRPDTGVIEVESGVTETIEINDYVVAFSGQPVQLADTSSVRAT
NSDGSSPVVDGDTVQYTSEGTYAGPATLTFEVTDALDINDDDILTSVVTLDIMVVSTENQ
PPRMRDGSLAAEQGGEAVNLDIARLAEDPDGVSTDLQYRIAEEAPGFQAALDGYILTVSA
DEDTPAGSSQDLTIEVTDGESDPVQATIVLEATASNRPLISTNPDDLGEVFQGDSVTADV
LANDSNPFPGEPREILGAVVTSGQGNAEISGEQVVVTPGADFVGRLSVTYTVVDVTGEAS
RAVEGQITAAVLGVPEAPSIPLVEEVANREVTLSWTAPQDNGAPITGYTVSHGGGSQACA
TTTCTITGLTNGTTYTFTVLATNAVGDSPESAASAEATPDVRPEAPGAPTVEFGDGELSL
DWSEPANEGTPISSYDVQISPSGGAGQQSVTGTEMVWTGLTNGQNYTFRVRALNDAPEPG
LWSEWSVAEHPSGPPLRPQAPSASRIDDSAGGRLQVSWRAPDANGDPISAYELRMYQDGA
LAQTFTPGANETSREVRVENAHDYHFTLVATNRSGSSEVSPQSESVRSFGAPGKTTGVSA
RPTGTDNTAEMSYSAPSNNGQEISRYEYSLSGGSAQAVPSNGVFTVPSDGQNYQIRIRAC
NTYCGAWSDSSSNFSTYGPPGAGAISLSSSADGQRVTFTWTTSANNNGAAIASSRYRIDG
GGWSSWGSRNDRASVGGNWEEMHRIEVQVRNEHGQPSGSATRNQRAEPDPTPPPPPPSAS
VTMRAGSSAVGQDGCTHSSCAFLAFDYDNLDGGNYQIEFYASAAGSGVWRNYTANLSGDG
RYQATSYRGRPGETVRVVIRGPSGTLQDSMTW
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
gtggccagtgcgaccgtcctctcgctggtgctcggcaccgtcgtcgcgctgagcctgaac
tacgagggtgtggcgaccgcggatgtcgacctcaacgacggcggcgtctgggtctccaac
aacgagtccatcctggtcggcaggctgaacttccccgtcggcgagatcgacgcggcgctc
gccgcgctcagccaggacgtcgacctgctccagcgcgaggacgtcgtcttcatccgtgac
cgtgctgggcagaccctgcagcgggtggaccccgtctcggtcgccgtccgcggcagcgcc
gtgccgctgcccaccggctccgacgtccagctcggtgacaacaccgtgggcgtgctggtg
gaggagaccggcgagtggcgggtgctcggtctggacgggctcgacgtgctcaccgagtcc
accgaggagccgcaggcggtgctcggcgaggatgccgcacaggcgatcgccgacgacggc
accgcctacgggctggacaccgacaccgggcagctgctgacgttcggcccgggtcagcgc
accgatccggtcaccaccgagctcgatccctccgtcttcgacggcgccgccacccagctg
agcgtcgtcggctccgagccggtggccctggccttcgacgccgagaccgaggacctgacc
ctggtgcgcccggaccaggacccggtcgatctcaccgggctcgaggtggacggagcctcg
gcgcggctgcaggcccccagccggggcgggaacgtggtggcgatcgccaccagcgacgcg
ctgatcaccgtgccgctggacggcagcgagccgcgggtgacgcgctcgccctcggcgggc
cagccggcgcagccggtgcaggtggccggctgcgtgcacagcgcgtgggccgccctgccc
gcggggtacctgcgccagtgcggcgatcaggccgcggaatcgttggaggtgccctcggcc
accggcggtgagctggtgttccgggtcaaccgctcctatgtggtgctcaatgagctggcc
accgggaactcctggatggtcgaggacgccctcgtcctggtcgacaactgggagacctcc
atcccgcccacggaggaggacgagaccgaggaggaggagtcccaggatctcgagcagcgc
gaggtcgagctggaccgggaggcggagaaccgccctccggtcgcggtcccggactccttc
ggtgtgcgcgctggccgcatcgccgtgctgccggtgctgcacaacgactccgatgccgac
ggcgacctgctcaccgcggcaccggaggggcagatcccggagtccttcgggcagctggag
acggtgctcggcggccgggcgctgcaggtgcgcgtcgcccccggtgccagcgggatcacc
agcttccagtacgtggccgatgacggccgcgggggcaccgacaccgcgaccgtggatctg
gaggtgatcccggagggccagaacagcccgcccgagcagctcaccgagatcaccgccgag
atcgcctcgggccagtcggcggaggtcaacgtcctcaacgacgtcctcgaccccgacggc
gatgcggtctacgtgacccgcaccctggaggacgccgggctgcaggtccagtccgatccg
aacggcctcatctcgatcgtggacccgggcgtgcccaccggtcagcgccaggtgcgcctg
gaggtcagcgacggcgccgcgacggccgaggtgctgatcgacgtcgagatccttcctgcc
gcggcccagccgccgacggccgtcttcgactacgcgaccgccttcgtggacgagaccatc
gagatcgacccgatcgcgaacgatctcgatcccaacgaccgcccgctgcggctcgcgaac
gtgcagagcgccgacggcgccgagatccgccagagcaccagttccaacaccttcagcttc
accgcgtcctcaccgggggactactacgtcgtctacgtggtggccgatgacgacggcctc
tccgccaccggactggtgcgcgtctcggtgcgcgccccggagaacctggacccggttgcc
gccaccgacaccgcctacctgcccccggacggcaccgtgctggtggacgtgctcgccaac
gacgaggacccggccggcggcgtgctggcggtgcagcagatcgacgtgcccgagggctac
ggcctgcgggtgtccatcctggagcaccgggtgctgcggatcacctccgaccgcaccctg
cagacgccggtgacgatcgactacaccgtctccaacggcacccggaccggggagggcgag
gtgctggtgctgccgctggatgcggagacgggcacccgcgccccgatcgccgtcccggac
gaggtgcgcgtgcgggccggtgaccacgtcaccatccccgtgctcagcaacgattcccac
ccgaacggcttcgacttcagcctcgatcccaccatcgccgaggagcctgccggtggcgtg
atgttcaccgccggggacgtggtgcgcttccaggcaccggacgaggcgggcaccctgacg
gcggtctaccggatcgtcgatgagtacggccgggaggattcggccaccatccggatctac
gtccaggcccgcgccgacggtgccaacggcgccccggagccgcgggacgtggagaccagg
gcgttctccggggagcggatccggatcccgatcgagacctacggcatcgatccggacggc
gactcggtgcagctgctgggcgtcgacagcccgccggcgctgggccgcgtggtcgaggtg
ggcgccacctacatcgactaccaggccttcaccgactccgccggcacggacgagttcacc
tattcggtgcgcgaccggctcggtgcgatcgcctcggccgaggtgacggtcggggtgatc
ccgcccccgagcgtcaaccgcccgccggtggtcgtcgacgacgagatcaccgtgcccccg
gggcgtccgatctcggtggacgtcctcgccaacgacaccgatcccgacggcgaccagctc
gccttcgacgatccggccttctccgagcaccccgggaccgacccggaggtccgcgacggc
aaggtcgcactgatctcgccggagtcgaccggcgaccacctgatcacctatcacgtcagc
gacctgcacggcgggacggccagcggcctgctgacggtcacggtcgaccccgacagcccg
ctgcagccgccggtcgccgtcgatgacgtggtccctcctgccgccatcctcgaccgtgag
gtcattacggtcgacgtgctcgagaacgactccgacccggacggcagcgtcgaggccctg
acggtcgacatcccggacgggcaggagagtgccacctccccggacggcaagggcgtgcag
atcaccctcaccccgacccggcaggtggtgacctaccggatcaccgacagcgacgacctg
gtctcctatgcgttcatcgaggtgcccgggaccgaggacaccgggccggtgctgcgcccg
gacacgggagtcatcgaggtcgagtccggggtcaccgagacgatcgagatcaacgactac
gtggtggccttctccggccagccggtccagctcgccgacaccagctcggtgcgggcgacc
aactccgacggctccagcccggtggtggacggcgatacggtccagtacacctccgagggc
acctacgccgggccggcgaccctcacattcgaggtgaccgacgccctcgacatcaacgac
gacgacatcctcacctccgtggtcacgctcgacatcatggtggtctccaccgagaaccag
ccgccccggatgcgggacggctccctcgccgcggagcagggcggggaggccgtcaacctg
gacatcgcacgactcgcggaggaccccgatggtgtctccacggacctgcagtaccggatc
gccgaggaggctcccggtttccaggccgcgctggacggttacatcctcaccgtctccgcc
gatgaggacaccccggcggggtcctctcaggatctgacgatcgaggtcaccgacggcgag
tccgacccggtgcaggcgaccatcgtgctggaggcgacggcgagcaaccggccgctgatc
tcgaccaacccggacgacctcggggaggtcttccagggtgactcggtgactgcggacgtc
ctcgccaacgactccaacccgttcccgggtgagccgcgcgagatcctcggcgccgtggtg
accagcgggcaaggcaatgccgagatcagcggcgagcaggtggtggtcaccccgggagcg
gacttcgtgggccgcctgagcgtgacgtacacggtggtggacgtgacgggggaggcgagc
cgcgccgtggaggggcagatcaccgccgccgtgctgggggtccccgaagcgccgagcatc
ccgctggtcgaggaggtcgccaaccgcgaggtgacgctgagctggacggctccgcaggac
aacggtgccccgatcaccggctacaccgtcagccacggcggcggttcgcaggcgtgcgcg
accaccacctgcaccatcaccggcctcaccaacgggaccacgtacacgttcaccgtgctg
gccaccaatgcggtcggtgactcgcccgagagcgccgcctccgccgaggcaaccccggat
gtgcgaccggaggcgcccggcgcgccgacggtcgagttcggcgacggcgagctcagcctg
gactggtcggagccggcgaacgagggcacgccgatctcctcctacgacgtgcagatctct
ccctccggcggcgcgggtcagcagtccgtgaccggcaccgagatggtctggacagggctg
acgaacggccagaactacaccttccgggtgcgtgcgctcaacgatgcccccgagccgggc
ctgtggagcgagtggtcggtggccgagcacccctccggtccgccgctgcggccgcaggca
ccgagcgcctcgcggatcgacgactccgccggtggccgcctgcaggtctcgtggcgcgca
ccggatgccaacggtgatccgatctccgcctacgagctgcggatgtaccaggacggtgcg
ctggcccagacgttcaccccgggtgcgaacgagacctcccgcgaggtgcgggtggagaac
gcgcacgattaccacttcacgctggtggccacgaaccggtccggcagctcggaggtctcg
ccgcagtcggagagcgtgcgttccttcggcgcaccgggcaagaccaccggcgtgagcgcg
cgaccgaccggcaccgacaacacggccgagatgagctactcggcgccgagcaacaacggc
caggagatcagccggtacgagtactccctgagcggtggctcagcgcaagcggtgccgagc
aacggcgtgttcaccgtgccgagcgacgggcagaactaccagatccggattcgtgcgtgt
aatacctactgcggcgcgtggagcgattcctcgagcaacttcagtacgtacggcccgccg
ggcgccggagcgatctcactcagctcgtcggcggacgggcagcgcgtcacgttcacctgg
accacgagtgcgaacaacaatggcgccgccatcgcttccagccggtaccgcatcgatggc
ggtggctggtcctcgtggggcagccgcaacgaccgggcgagcgtcggtggcaattgggag
gagatgcaccgcatcgaggttcaggtgcgcaacgagcacggccagcccagtgggagcgcg
acacgtaaccagcgcgcggagccggacccgacgcctccacctccgccgccgtccgcatcc
gtcacgatgcgtgccggtagcagtgccgtcggacaggacgggtgcacccattcctcctgt
gccttcctcgcgttcgactacgacaacctcgacggtggcaactaccagatcgagttctac
gcgtccgccgcaggcagcggggtgtggcgcaactacaccgcgaacctgagcggcgacggg
cggtaccaggcgacgtcgtatcgcggtcgcccgggcgaaacagtccgcgtggtgatccgg
gggcccagcggcacgctccaggattcgatgacttggtga
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