Ruania suaedae: LQF12_09520
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Entry
LQF12_09520 CDS
T08275
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rsua
Ruania suaedae
Pathway
rsua03030
DNA replication
rsua03430
Mismatch repair
rsua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQF12_09520 (holA)
03430 Mismatch repair
LQF12_09520 (holA)
03440 Homologous recombination
LQF12_09520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsua03032
]
LQF12_09520 (holA)
03400 DNA repair and recombination proteins [BR:
rsua03400
]
LQF12_09520 (holA)
Enzymes [BR:
rsua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQF12_09520 (holA)
DNA replication proteins [BR:
rsua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQF12_09520 (holA)
DNA repair and recombination proteins [BR:
rsua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQF12_09520 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UFU01759
LinkDB
All DBs
Position
complement(2057556..2058560)
Genome browser
AA seq
334 aa
AA seq
DB search
MPPARRSRPTTGPSWRDVPLAPVVLVRGGEGLLVDRAVARLGALVRERDPEAEVTVLEAG
AYERGHLEVLTSPSLFGEHRHLVVEGAESASDAFIEDALAHVAAAGPDVDDVTLVIRHEK
GVRGKKLLDAIAKAGYPVVTCEAIKRDGDKAEFAAAEFQAAGRRATPAAVQALVEALGSD
LRELAAGCAQLIADTTGTITPDVVQRYHGGRVEATGFRVADAAVAGKQTEAITLVRHALE
TGVDPVPLVAVLAMKLRTLAKVAATRGRASAAELGLAPWQIDRARRDLQGWTPEGLARAI
TAVADADAQVKGEGRDARYAVERAVLTIAAAREG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcctgctcgccgctcccgacccaccaccggcccgtcctggcgagacgtcccgctc
gccccggtcgtgctcgtgcgcggcggggagggcctgctcgtcgaccgcgccgtcgcccgg
ctcggggcgctcgtgcgcgaacgcgaccctgaggccgaggtcacggtgctggaggccggc
gcctacgagcgcgggcacctggaggtgctcaccagcccgtcgctgttcggcgagcaccgc
cacctggtggtcgagggcgccgagtccgcctcggacgcgttcatcgaggatgcactcgcc
catgtcgccgccgcggggccggacgtcgacgacgtcacgctggtgatccggcacgagaag
ggtgtgcggggcaagaagctcctggacgcgatcgccaaggcgggctacccggtggtcacc
tgtgaggcgatcaagcgcgacggtgacaaggccgagttcgccgcggccgagttccaggcg
gcgggccggcgcgcgactccggcggcggtccaggccctggtcgaggcgctcggctccgat
ctgcgtgaactggccgccggctgcgcccagctgatcgccgacaccaccgggaccatcacc
cccgatgtggtgcagcgctaccacggcgggcgggtcgaggccaccggcttccgggtggcc
gatgccgccgtcgccggcaagcagaccgaggcgatcacgctggtccggcacgccctggag
acaggggtcgacccggtcccgctggtcgcggtgctggcgatgaagctgcgcaccctggcg
aaggtggccgccacccgcggccgggcgagcgccgctgagctcgggctcgccccctggcag
attgaccgtgcccgccgggacctgcagggatggacacccgaggggctcgcccgggcgatc
accgccgtcgcggacgccgatgcgcaggtcaagggggagggtcgggacgcacgctacgca
gtcgaacgcgcggtcctgaccatcgcggccgcccgcgagggctga
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