Ruania suaedae: LQF12_11570
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Entry
LQF12_11570 CDS
T08275
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsua
Ruania suaedae
Pathway
rsua00300
Lysine biosynthesis
rsua00470
D-Amino acid metabolism
rsua01100
Metabolic pathways
rsua01110
Biosynthesis of secondary metabolites
rsua01120
Microbial metabolism in diverse environments
rsua01230
Biosynthesis of amino acids
Module
rsua_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsua00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQF12_11570 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQF12_11570 (lysA)
Enzymes [BR:
rsua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LQF12_11570 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UFU04665
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All DBs
Position
complement(2516212..2517492)
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AA seq
426 aa
AA seq
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MLHLGGLSAPWLAQTFGTPAYLLDVPGLRRRAADYRRAFTEAFAPAEVSVYYAGKAFLST
AVARWVQAEGLGIDTASAGELATALAAGVEGAAIGLHGNNKSVEEIDLALERGVGRLVID
SLPEIDLVAARAAALGRRAPVMVRVTTGVHAGGHDFIATAHEDQKFGLSLASGAALEALE
RIVAHEHLDLVGLHSHIGSQILDPEGFAAAAAALLGLRATLVQRTGHLAGELDLGGGYGI
AYTPQEQAVDIDALARSLAAACRAECERLGTAQPSYSFEPGRAIVGPNMLTLYRVGTVKP
VRLDGGGSRLYVSVDGGMSDNIRPALYGADYHAEIAGRSSSAGPVPARVVGKHCESGDIV
VRDVDLPADIRTGDLLAVPATGAYGRSMASQYNLVPRPPVVAVGEGQPREIVRRETVDDL
LALDLG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacctgggcgggctctcggcgccatggctggcgcagaccttcgggacccccgcc
tacctgctggacgtaccgggcctgcgccggcgcgccgccgactaccggcgcgccttcacc
gaggcgttcgccccggccgaggtgagcgtctactacgccggcaaggcgttcctgagcacc
gccgtcgcccgctgggtacaggccgagggcctgggcatcgacacggcctccgccggtgag
ctcgccaccgcgctggccgccggggtcgagggcgccgcgatcggcctgcacggcaacaac
aagtccgtcgaggagatcgatctcgcgctcgagcgaggcgtcggtcgcctggtcatcgac
tccctgccggagatcgacctggtcgcggcccgggccgccgccctcggacggcgcgctccg
gtcatggtgcgggtgaccaccggcgtgcacgccggcgggcacgacttcatcgcgacggcg
cacgaggaccagaagttcgggctctccctcgccagtggcgccgcgctggaggcgctggag
cggatcgtcgcccacgagcatctcgacctggtcggtctgcactcccacatcggctcccag
atcctcgaccccgagggcttcgccgccgcggccgccgctctcctcggcctgcgcgccacg
ctggtgcagcgcacgggccacctggcgggcgagctggatctgggtggcgggtacggcatc
gcctacaccccccaggagcaggcggtggacatcgacgcgcttgcgcgctcgctcgccgcg
gcgtgccgggcggagtgtgagcggctcggcaccgcgcagccgtcctactccttcgagccg
ggccgggcgatcgtcggcccgaacatgctcaccctctaccgcgtcggcaccgtcaagccg
gtccggctggacggcggcggatcgcggctgtacgtctcggtggacggcgggatgagcgat
aacatccgccccgccctgtacggggcggactaccacgccgagatcgccggacggagctcg
tccgccggcccggtgccagcccgggtggtcggcaaacactgcgagagcggtgacatcgtg
gtgcgtgacgtcgacctgcccgccgacatccgcaccggcgacctgctcgccgtgcccgcc
accggcgcctacggccgctcgatggcctcccagtacaacctggtcccgcgcccgccggtg
gtcgccgtgggcgaggggcagccgcgcgagatcgtgcggcgcgagacggtggacgacctg
ctcgcgctcgacctcggctga
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