KEGG   Ruania suaedae: LQF12_15980
Entry
LQF12_15980       CDS       T08275                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
rsua  Ruania suaedae
Brite
KEGG Orthology (KO) [BR:rsua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsua03016]
    LQF12_15980
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rsua02048]
    LQF12_15980
Transfer RNA biogenesis [BR:rsua03016]
 Prokaryotic type
  tRNA degradation factors
   LQF12_15980
Prokaryotic defense system [BR:rsua02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LQF12_15980
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: UFU02960
LinkDB
Position
3462022..3462426
AA seq 134 aa
MSTLYLLDTNVLVALLRGQAERAHPRLRAAEGRIAVSTISEMQLEYGVERSQEPLRNRQA
VDELLSLVEILEFDTIAAMHAGRIRAVLASAGAPIGPFDSLLAGHARSLGLVLVTNNTRE
FTRVPGLEVEDWLA
NT seq 405 nt   +upstreamnt  +downstreamnt
gtgagcacgctctacctgctcgacaccaacgtgctcgtcgccctcctgcgtggccaggct
gagcgtgcgcacccccggctgcgtgccgccgagggccggatcgccgtctccacgatcagc
gagatgcagctggagtacggcgtcgagcgttcacaggagccgctgcggaatcggcaagcg
gttgacgaactgctctcgctcgtcgagatcctggagttcgacacgatcgcggccatgcac
gccggacggatccgtgcggtcctggcgtctgccggggctccgatcggtccgttcgacagc
ctgctggccggacatgcgcgctcactcgggctggtgctcgtcacgaacaacacccgggag
ttcactcgcgtgcccggcctggaggtcgaggactggctggcctga

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