Rickettsia slovaca 13-B: Rsl_1117
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Entry
Rsl_1117 CDS
T01671
Symbol
groEL
Name
(GenBank) 60 kD chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rsl_1117 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsv03019
]
Rsl_1117 (groEL)
03110 Chaperones and folding catalysts [BR:
rsv03110
]
Rsl_1117 (groEL)
03029 Mitochondrial biogenesis [BR:
rsv03029
]
Rsl_1117 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsv04147
]
Rsl_1117 (groEL)
Enzymes [BR:
rsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rsl_1117 (groEL)
Messenger RNA biogenesis [BR:
rsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rsl_1117 (groEL)
Chaperones and folding catalysts [BR:
rsv03110
]
Heat shock proteins
HSP60 / Chaperonin
Rsl_1117 (groEL)
Mitochondrial biogenesis [BR:
rsv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rsl_1117 (groEL)
Exosome [BR:
rsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rsl_1117 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
Rsl_1117 (groEL)
Exosomal proteins of breast cancer cells
Rsl_1117 (groEL)
Exosomal proteins of colorectal cancer cells
Rsl_1117 (groEL)
Exosomal proteins of bladder cancer cells
Rsl_1117 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_DEC_PhiTE
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEV92500
UniProt:
A0ABM5MPD7
LinkDB
All DBs
Position
complement(918437..920080)
Genome browser
AA seq
547 aa
AA seq
DB search
MATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSI
ELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGM
DLAVNAVVEEIKKSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEA
KNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAV
VQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTKGEL
ITEDLGMKLENVSIKSLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDY
DKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLL
HASQPLTKLKVENKDQQAGIEIVIEALKDPLKQIVENAGENGGVVVGKLLEHKDKNYGFN
AQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKAEPMPMRGGMG
SMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacttattaaacacggctcaaaagctcgtgagcaaatgttagaaggcatt
gatatacttgcagatgcagtaaaagttactttaggtccaaaaggcagaaatgtacttata
gagcaatcatttggttcaccgaaaattacaaaagatggtgtgacggttgcaaaatcgatc
gagttaaaagataaaattagaaatgcgggagctcagttattaaaatcagctgctacaaaa
gctgcagaagtagccggtgatggtactactacagctacggtacttgctagagctttggct
cgtgagggtaataagctagtagctgccggttataatcctatggatttaaagcgtggtatg
gatttagcggtaaacgcagtagtagaagaaattaaaaaatccagtaaaaaaatcaatagc
caagaggaaatcgcacaagtcggtactatctcttcaaacggtgataaggaaatcggtgag
aaaattgctaaggcaatggaggaagtcggtaaagaaggcgtgataaccgttgaagaagca
aagaattttagcttcgatgttgaagtagttaaaggtatgatgtttgatagaggttatcta
tcaccgtattttgtaacgaattctgagaaaatggttgctgagcttgaaaatcctttcatc
ttactatttgagaaaaaattatcaaatttacaaccgatgttacctatacttgaggctgta
gtacaatcacaacgcccgctattaattattgctgaggatgttgagggcgaagctcttgca
acgcttgtagtcaatagattacgtggtggtttaaaagttgcggcagtaaaagctcccggt
tttggcgatagaagaaaagcaatgatggaagatattgctatcctaactaaaggtgagctt
attactgaagatttaggtatgaagcttgaaaatgtgagtattaagagtctagggacagca
aaaagagtaacaatttctaaagaaaataccgtaattgttgacggtaacggtgataagaaa
aatattgaagatagagtattacaaattaaatctcaaatagctgaaactacttctgattat
gataaagaaaaactgcaagagcgtttagctaaactttccggcggtgttgccgtattaaag
gttggcggtgctacggaagttgaagtgaaagagcgtaaagatcgtgttgaagatgcactt
gctgctacaagagcggcagttgaggaaggtgttgttgccggtggcggtgtaacattactt
catgcatcacaacctttaacaaagcttaaagtagagaataaggatcaacaagcaggtatt
gaaatagtaatagaagctttaaaggatccgttaaaacagattgttgaaaatgccggtgaa
aacggtggcgtagtagttggtaaattactagaacataaggataaaaattatggctttaat
gctcaagatatgcaatatgtcgatatgattaaagcaggaattattgatccggctaaagta
gtgcgtactgcacttcaagatgctgcttccgttgcttcgttaattattaccacggaaact
ttaattgttgacgaaccttctgataaggcagagccaatgccaatgcgtggcggtatggga
agcatgggcggtatggatttctaa
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