Rickettsia slovaca 13-B: Rsl_1138
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Entry
Rsl_1138 CDS
T01671
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rsl_1138 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsv03021
]
Rsl_1138 (rpoA)
03400 DNA repair and recombination proteins [BR:
rsv03400
]
Rsl_1138 (rpoA)
Enzymes [BR:
rsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rsl_1138 (rpoA)
Transcription machinery [BR:
rsv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rsl_1138 (rpoA)
DNA repair and recombination proteins [BR:
rsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rsl_1138 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
AEV92510
LinkDB
All DBs
Position
complement(930982..932004)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagttgcttatgaa
aattttcctgaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacgtctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcggaagtgattctaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gaaacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aatagttatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaagagtgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgatgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaatccgatatgctaagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatattcaggaattatctaaacgttatgaagattcttataat
taa
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