Rickettsia slovaca 13-B: Rsl_1494
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Entry
Rsl_1494 CDS
T01671
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rsl_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsv03400
]
Rsl_1494
Enzymes [BR:
rsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rsl_1494
DNA repair and recombination proteins [BR:
rsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rsl_1494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Nop
Motif
Other DBs
NCBI-ProteinID:
AEV92757
LinkDB
All DBs
Position
complement(1220327..1221112)
Genome browser
AA seq
261 aa
AA seq
DB search
MNNTLKWLSAIGVEYYCHEHPPQLKVRNNTELTEKPQVKLMSTKETAFNMNDKVHDNITL
ARSLADKANNIEELKESLLNFNGCELKKFATNTVFGDGNLEAKIMLIGEAPGSTEDLKGI
PFYGESGNLLDNMLHAIGISRKNNAYITNTVFWRPPANRQPTFEEVDICRPFVEKHIALI
NPQLIILVGSTAATSLLGKNSGITKIRQEYYFYTNKYLSAPIQTTAIFHPAYLLRQPMQK
RTSWYDLLKIKEYLVNNRLLA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacgcttaaatggttaagtgcaattggtgttgaatattattgccatgaacat
ccaccgcaattaaaggtacgtaataatactgaactaactgaaaagccacaagtaaaactt
atgtctacaaaagaaactgcattcaatatgaatgataaagttcatgataatataacccta
gcaagatctcttgccgataaagctaataatatcgaagaactaaaagaatctctactaaat
tttaatggttgtgaacttaagaaatttgctactaatacggttttcggtgacggtaatttg
gaagctaaaattatgttaataggcgaagccccgggaagtactgaagatttgaaaggaata
cctttttacggcgaaagtggcaatttacttgataatatgctacatgctatcggaatttca
cgaaaaaataacgcttatattactaatacggtattttggcgtcctcctgctaatagacag
ccgacgttcgaagaagtcgatatttgtagaccttttgtcgagaagcatattgctcttatt
aacccgcagctaattattctagtcggtagcacggctgcaactagcttacttggaaaaaat
tcgggtattactaaaattagacaagaatattatttttataccaataaatatctatccgct
cctattcaaactacggcaatcttccaccctgcctatttactccgccaacctatgcaaaaa
cgcacctcttggtatgatttactcaagattaaggagtatttagtcaataatagacttctt
gcataa
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integrated database retrieval system
