Rickettsia slovaca 13-B: Rsl_1520
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Entry
Rsl_1520 CDS
T01671
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau chains
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03030
DNA replication
rsv03430
Mismatch repair
rsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rsl_1520 (dnaX)
03430 Mismatch repair
Rsl_1520 (dnaX)
03440 Homologous recombination
Rsl_1520 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsv03032
]
Rsl_1520 (dnaX)
03400 DNA repair and recombination proteins [BR:
rsv03400
]
Rsl_1520 (dnaX)
Enzymes [BR:
rsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rsl_1520 (dnaX)
DNA replication proteins [BR:
rsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rsl_1520 (dnaX)
DNA repair and recombination proteins [BR:
rsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rsl_1520 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_18
AAA_assoc_2
AAA_16
RNA_helicase
TIP49
AAA_24
Viral_helicase1
AAA_17
DUF3646
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEV92779
LinkDB
All DBs
Position
1246741..1248270
Genome browser
AA seq
509 aa
AA seq
DB search
MLDINSSNQYIPFARKYRPSNFAELQGQEVLVKVLSYTILNDRLAGGYLLTGIRGVGKTT
SARIIAKAVNCSALITENTTIKTCEQCTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIE
SAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKIPATIISR
CQRYDLRRLSFEEIFKLLEYITKQENLKTDIEALRIIAYKSEGSARDAVSILDQAASMSV
KSDNIISPQVINQMLGLVDSSVIIEFVECIIHRETEKAINLINKLYGSSVNLEIFIESAS
DFIAYLNKVKMLPNYCLPIYESFNDRTKNILDKTSLPHLSILWQIYNKGVGEIKISYNQL
TETEMLVIKSIYSTSLPLLTDFDGNNQNLNQSINPEIKKKFEIVDFLEYLYKNNEIDIYY
FLLNHTELKNLSNNRLEFVSLEVTSKIKRQIDDLLAAFTNEKFEIVIIKEQNKQTLKNQL
IGKIEASNDFGLIKKHFPNITISDILLKS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctagatataaattcatcaaatcaatatattccttttgcaaggaaatatcgtcctagt
aactttgccgagcttcaggggcaagaggtattagtcaaagttttaagctatactatttta
aacgataggctcgccggaggctatcttttaacaggtattagaggagtcggtaaaactact
tccgcccgaattattgctaaagccgtcaactgttctgctttaattaccgaaaatacgact
attaaaacatgcgagcaatgtacgaattgcatcagctttaataatcataatcaccctgat
ataatcgaaattgatgcggcaagtaaaactagcgtagatgacatacgtagaattatagaa
tccgccgagtataagcccctacaaggtaagcataaaatcttcattattgatgaggtgcat
atgctctctaaaggggcatttaatgcacttcttaagacactggaagaaccaccacctcat
ataatatttatctttgcaacgacggaagtacaaaagatacctgcaactattatctcaaga
tgtcaacgttatgatttaaggcggttgagttttgaagagatttttaagctacttgaatat
ataactaagcaagaaaatttaaaaaccgatatagaagcactaagaattatagcttacaaa
tcggaagggtcggcacgtgatgcagtctctattttagatcaagcagctagtatgtcggtg
aaatctgacaatataattagtcctcaagtaattaatcaaatgcttgggcttgtcgatagt
tcggttataatagaatttgtcgaatgtattatccacagagagacggaaaaagctataaat
ttaataaataaactttacggttcttcggttaatcttgagatttttatagaatcggcatca
gattttattgcttatcttaataaagtaaaaatgttacctaattattgtttgcctatatat
gaatcatttaatgatagaactaaaaacatattagataaaaccagcttgccgcacttatca
atcttatggcaaatatataataagggagtaggggaaataaaaatttcctataaccaacta
acagaaacggaaatgttagttataaaatctatatattcgacgtcgctacccttgcttaca
gattttgacggtaataatcaaaatttaaatcaatcaattaatccggaaataaaaaaaaaa
tttgaaattgtagattttcttgaatatttatataaaaataatgagatagatatatattat
ttcctgctcaatcatacggaacttaaaaatctcagtaataatagattagagttcgtaagt
cttgaagttacaagcaaaataaaaagacaaattgacgatttgttagctgcttttactaat
gaaaagtttgagatagtaataataaaagagcagaacaagcaaaccttaaagaatcagtta
attggtaagattgaagcaagtaacgattttggtttaattaaaaaacatttcccaaatata
acaatttcggatattttacttaaaagctaa
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