Rickettsia slovaca 13-B: Rsl_772
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Entry
Rsl_772 CDS
T01671
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rsl_772 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsv03019
]
Rsl_772 (pnp)
03016 Transfer RNA biogenesis [BR:
rsv03016
]
Rsl_772 (pnp)
Enzymes [BR:
rsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rsl_772 (pnp)
Messenger RNA biogenesis [BR:
rsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rsl_772 (pnp)
Transfer RNA biogenesis [BR:
rsv03016
]
Prokaryotic type
tRNA degradation factors
Rsl_772 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_DUF2096_C
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEV92261
LinkDB
All DBs
Position
complement(649766..652012)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSVTWNGQVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFLPLT
INYREMAYAAGKIPGGFFKHEGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLALLKTSQLDLVVA
GTSDSVMMVESEAHLLSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQALYPAS
LKKEIEKLFVKEIEQAFAIKSKQERSTNLDLIPEKVLTHFVSDIENKKYSNYQIESALKA
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
VDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKNFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIVVEPEIGEIFNGTVVKVLDSGAFINYVGNKDGFVHISEVSGERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKSSNNTKPKTNVNNTKDNSEPEQR
RDSSKKRAWNEDNNAETAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggcaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ttatgtacggcagtagtagctaacaaagcaaaagagggcataggttttcttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacat
gaaggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgaaactccagtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatccgacacttgcattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagctcatttactttctgaagaacaa
atgttagaagccgtaaaatttggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagctttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaattaaa
tctaaacaagaacgtagcactaatttagatttaatacctgaaaaagttcttacacatttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaatcgaatcagctttaaaagct
attgaatcagatatattgcgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
gtagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccgccctactctgtaaatgaagcaatgccaatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggaatctaacggttcttcttca
atggcaactgtttgtggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
ccggttgcgggtattgctatgggacttgttaaggaaggtaaaaattttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactagc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gttatcagtaaaccaaataacgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccgggcggtaaagtaataaaggaaatt
tgtgaaactagtggtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgtcgttgaacct
gaaatcggtgaaatatttaacggtacggtagtgaaagtcttagattccggtgcttttatt
aattatgtaggtaataaagacggctttgttcatattagtgaagtatcaggagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagttaagctaataggcttt
gataataaaggcaaagcaaaattaactattaaaaatgccgataaagataaatcttcaaat
aatacaaagccaaaaactaatgttaataatactaaggacaattcagaacctgagcagcga
cgtgattctagtaaaaaacgagcttggaatgaagataataatgctgaaactgctgaagta
attacagaacgtaagtattttaattga
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