Rickettsia slovaca 13-B: Rsl_813
Help
Entry
Rsl_813 CDS
T01671
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rsl_813 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsv03021
]
Rsl_813 (rho)
03019 Messenger RNA biogenesis [BR:
rsv03019
]
Rsl_813 (rho)
Transcription machinery [BR:
rsv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Rsl_813 (rho)
Messenger RNA biogenesis [BR:
rsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rsl_813 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
ATPase_2
AAA_25
OB_RNB
Fungal_virus_P2_C
Spore_III_AA
S1CSD-TOTE-2
NACHT
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
AEV92295
UniProt:
A0ABN4AG78
LinkDB
All DBs
Position
686376..687752
Genome browser
AA seq
458 aa
AA seq
DB search
MNTTNKESTAELNNTESNNNYNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGVLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
tataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggagttttaatagtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaacccccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttccgtgcgtggggaggttgtt
agctctactttcgatgaaccggcaagtaggcacgtgcagcttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagatgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataataccgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcgcttactataatcggtacggctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgaaatagttctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgat
ccaatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag
DBGET
integrated database retrieval system
