Rickettsia slovaca D-CWPP: MC3_03920
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Entry
MC3_03920 CDS
T01801
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsw
Rickettsia slovaca D-CWPP
Pathway
rsw03410
Base excision repair
rsw03430
Mismatch repair
rsw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MC3_03920
03430 Mismatch repair
MC3_03920
03440 Homologous recombination
MC3_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsw03400
]
MC3_03920
DNA repair and recombination proteins [BR:
rsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MC3_03920
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MC3_03920
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MC3_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFD19713
UniProt:
H8LQ02
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Position
682875..684638
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AA seq
587 aa
AA seq
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MKPQASINGKIWQQKLINEDIVTELCRSFKISDLLARIVSLRVNNLEEVENFLRPKIKNL
LPDPFHLLDMEKAVDRTVTAILNNQKICIFADYDVDGATSAALLKNIFRDLNILCDIYVP
DRIAEGYGPTPFAMQKIKDNGTELLITVDCGAMAHEALKYAKDVNLDVIVIDHHIATEIL
PDAVAIVNPNRIDEKSEYKHLAAVGVAFLFATAILSNLKKQNYFTQTMLQPNLMQYLDLV
ALGTVCDMMKLTGLNRAFVASGLKVMQQRQNIGIKTLYDMAGLHEIPKCYHLGFILGPRI
NAGGRVGKSSLGAHLLSTSCSNEANKLAKELEKHNNERKVIELLMIEEAMEIALTQQDSS
LLFIVKEGWHPGVIGIVAGKLKEKFDKPVAVIALNDGIGKASCRSILGIDFGAEIINAKS
KDLLIAGGGHAMAAGFTVTAEKLQELQNFFNNAFRISITKLENYKHAEYDIDLTVNSVNF
PLMEELNTLEPFGQGNHEPIFKFDDLFVLKADIVGSKHIKCMLVPNKRGFGNKALSAIAF
NSVGTAFEDVLLSPKAKNIAAIGTLKTNNWQDNYTIQLIIKDILLKE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaagcatctataaacggtaaaatctggcagcagaaactgattaacgaagat
atagtcaccgagttatgtcgtagtttcaaaattagtgatttacttgctaggatagtatca
ttaagagtaaataatctagaggaagtagaaaatttcttgagaccgaaaatcaaaaattta
ttacctgatccttttcatctacttgatatggaaaaggctgtagacagaactgttacagct
attttaaataaccaaaaaatatgtatctttgccgattatgatgtagacggtgctacttca
gccgctttacttaaaaatatttttagagatttaaatatactatgtgatatttatgttcct
gatcgtatagctgaaggatacggtccaactccttttgctatgcaaaaaattaaagataac
ggtacagaattattaattacggttgattgcggtgctatggcacatgaagccctaaaatac
gcaaaagacgttaaccttgatgttatagtaatcgatcatcatatagctacggaaatatta
ccggatgcagtagctatagtaaatccaaatcgtattgatgaaaaaagcgaatataaacat
ttggcagccgtaggagttgctttcttatttgcaactgcaatattatcgaatttaaagaag
caaaattatttcacgcaaacaatgcttcagcctaatctaatgcagtatctagatttagtg
gctcttggtactgtttgcgatatgatgaaattaacaggcttaaatcgtgcatttgttgca
agcggattgaaagtaatgcaacaaaggcaaaatatagggattaaaacattatatgatatg
gcaggacttcatgaaataccaaaatgttatcatttagggtttattctaggtccgcgtatc
aatgcaggcggtagagtaggaaagtcaagtttaggggctcatctcctatctactagttgt
tctaatgaagcaaataaattagctaaagaacttgaaaaacacaataatgagcgtaaagta
attgagttattaatgatagaagaagcgatggaaattgctttgacacaacaagatagtagt
ttattatttatcgtaaaagaaggatggcatccaggcgttataggaatcgttgccggcaaa
ttaaaagaaaaatttgataagccggtggcagttatagctttaaatgacgggattggtaaa
gcttcatgccgttctattttaggtattgattttggtgctgaaattatcaatgctaaaagt
aaagatttgctaatagcaggcggaggtcatgctatggcggcaggttttaccgtaacggct
gaaaaattacaagaattgcagaatttttttaataatgcttttagaattagtataactaaa
ctagaaaattataagcatgcggaatatgatattgatttaacggttaatagtgtgaatttc
cctttaatggaggaattaaacactttagagcctttcggtcaaggaaatcatgagcctata
tttaaatttgatgatttatttgtattaaaagcggatatcgttggaagtaagcatattaaa
tgtatgcttgttccaaataagcgaggctttggtaataaagccttatctgctattgctttt
aattcggtaggaactgcatttgaagatgttttattaagccctaaagcaaaaaatattgcc
gcaataggaacgttaaaaactaataattggcaagataattatactattcaattaattata
aaagatatacttctaaaagagtag
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