Rhizoctonia solani: RhiXN_00110
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Entry
RhiXN_00110 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K13091
RNA-binding protein 23/39
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_00110
Spliceosome [BR:
rsx03041
]
Common components
Common spliceosomal components
General mRNP proteins
RhiXN_00110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
67022392
NCBI-ProteinID:
XP_043178941
UniProt:
A0A8H7H1X0
LinkDB
All DBs
Position
4:complement(join(440337..440468,440527..440632,440685..440756,440809..440896,440959..441296,441349..441483,441535..441735,441796..442203,442264..442301))
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AA seq
505 aa
AA seq
DB search
MSHSPYPEQDQKSSASSPRARRSSRDRGSRYDRERERERDRDRDNHRRRHSPARRRSRSR
DRRDRDRDRYRDDRDRDRDRERDRDRRRDRDGRDDRRRKRDDDRDVDDVRAKRMREGSTG
AETVGRASSRDSARRSDHSRKQEEPAPKERASPIYDDPVIEEINDEDSEARSVFVSQLAA
RLTARDLGYFFEDKLGEGAVRDARIVTDRLSRRSKGIGYVEFKNIDLVNKAIALSGTIVM
GLPIMIQLTESERNKIGPSSSLHLPPGVSHPHAGSMQLYVGSLHFNLTESDIRQVFEPFG
ELDFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQMEGFELAGRQLRVNTVHDKGQGTV
RISTAPQDSLEDTGGVLNNSTSRHQLMQKLARTEQPSKNNTMLMKSNIPQTLSSRCVLLR
NMFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESEGEIYIKFESVESAEKAIK
GLNGRWFGGKQVTASPIPDAIMQAH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcgccttatcctgaacaggaccagaaatcgtcggctagctctccacgagct
cgacgttcgagccgggaccgtggctcacgctatgatcgagaacgtgaacgagagagggac
agggatagggacaaccacagacgccgacacagccctgctcgacgccgtagccgcagccgg
gaccgcagggatcgggaccgcgacaggtacagggacgaccgggatcgagacagggaccgc
gagagagatcgggataggcgccgagaccgggacggcagagacgacaggcgccgcaagcga
gacgacgaccgcgacgtagacgatgtccgtgcaaagcgtatgcgagaagggtccactggt
gccgagactgttggccgtgcgagctcaagagactcggctaggcgctcggatcatagtcgc
aaacaggaggaacccgctccaaaagaacgcgcatcgcctatatacgacgacccggtgatt
gaggaaatcaatgatgaagattcagaagcgcgctcggtgtttgtgtctcagttggctgcg
aggctcaccgctcgcgatttaggctatttctttgaagacaagctcggcgaaggcgctgtt
cgtgatgcccgcattgtgactgaccgattgtctcgtcgctccaagggaatcgggtacgtc
gagttcaagaacatcgatcttgtcaataaggctatcgccttgtcgggtacgatagtcatg
ggattaccaatcatgatccaacttacagagtctgagcgtaacaagatcggaccttcaagc
agtttacacctcccaccaggtgtctcccacccacacgcgggatcgatgcaactctacgtc
ggttctctacacttcaacctcaccgaatccgacatccgtcaagtctttgaaccattcggc
gaactcgactttgtcgaccttcatcgtgatcccgcgacaggcaaatcaaaagggtactgc
ttcatccagtacaaacgccccgaggatgcaaggatggcgttggagcagatggaaggcttc
gagcttgccgggaggcagttgagagtgaacacggtgcacgacaagggacaaggcactgtg
aggatctcgactgccccgcaggattctttggaagataccggtggagttttgaataatagc
acctcccgacaccagcttatgcagaaacttgcccgcacggagcagccttcaaagaataac
actatgctgatgaaatccaatattccacagacactttcttcccgttgcgtactccttcgc
aacatgttcgatcctgacgaggaaaccgagcgcgactgggacaaagaccttgccgacgac
gtccgtggagaatgtgaggaaaaatacggtaaagtcttggatctcaaggtcgaaaaagag
tccgagggtgaaatctacatcaaattcgagtcggtcgaatcggcagaaaaggcgatcaag
ggactcaacggccggtggtttggcggaaaacaagtcactgcgagccctattccggacgcc
atcatgcaggcccactag
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