KEGG   Rhizoctonia solani: RhiXN_00239
Entry
RhiXN_00239       CDS       T09256                                 
Name
(RefSeq) nucleoporin
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
rsx  Rhizoctonia solani
Pathway
rsx03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    RhiXN_00239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_00239
   03036 Chromosome and associated proteins [BR:rsx03036]
    RhiXN_00239
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     RhiXN_00239
Chromosome and associated proteins [BR:rsx03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    RhiXN_00239
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nucleoporin_FG Nup98_GLEBS TonB_N
Other DBs
NCBI-GeneID: 67022521
NCBI-ProteinID: XP_043179070
UniProt: A0A8H8NV05
LinkDB
Position
4:complement(join(846743..846853,846909..846991,847042..847150,847204..847404,847459..847576,847627..848795,848843..848906,848957..849183,849258..849916,849994..850401,850455..851042,851093..851314,851366..851503,851560..851736,851835..852033,852084..852235,852288..852350,852401..852634,852685..852765,852831..852938,853008..853140))
AA seq 1747 aa
MFGSSWGQNNQNQQNQAQQGTGLFGQPAQQPQQQPQQGGAFGNTGFGSAGFGQQQQQQPG
QTGSIFGQPQQPQQNQQPGFGAFGGGSNTTSTFGQAKPFGSTGFGTTNTTATTAPSFSFT
GTSNPTPTNAFGTNTTGGFGTQNQTPTSTFGQPSTSTFGGGTTGFGSNTGGAFGSTNTTS
TFGTATNTGGGMFGAPKPATGGLFGAATTTTNAAGQGTASPAYQATQERDTAVGGSSTTL
HYQSITAMPAYRNFSFEELRAQDYAAGRKNSTSTGFGTSAFGSATNTTAPSTGLFGQPAQ
QNQPQQTGIFGQPAQPAQSTGLFAAIDWAIWPTCQQYCYDWNGLFGQQTNTTTGAFGSNT
GTTSSFGGGGLFGAKPATTGAFGAATTQPSTGFGTFGQNNQPQTGQTTSIFGQPQQNQQQ
PATAGFGFGTNNTANKPLFGQPAAQTQTTGLFGQPAQQNTGAGLFGQPAQNTAAAQPAQT
GGLFGGFGQNQQQAQPAQPSTGLFGQPAQTQPAATTGTGLFGGGGGLFGQNNQQQQQQPA
TSLFGKPAGTTGGLFGGTTTAAPATSGGLFGSTNAANTQQPATGGLFGQANKSIFGSTPV
ANPAQQTSIFGQSVQPASQPSLSASIDQNPFGSNPLFANLPPGPHVFSVSQNQAKKPLIS
VSPRKNFYRPSTPQLTKLRGFATPLRPHRLMLALIPLLGQSPSLTASLSDNRSLGGRSSV
KKLVLDKDVNASDLPSSGSLFAAAAGTRSTPSKSKVVFHPDLVQRAVAGDGLFNSTVSRT
AVTARASIDLGPSHSYSANAPVREESTVRDDTPAATATDGDYWMVPSLAELQGMMDLTTV
YAISDIPEKTVLFEEGACTVYPDESQKAARGEGLNVHSEISLEKCWPRDKATRAPIKNPN
DPAWQRQERKLRKMKDTEFISFEPESGVWTFRVPHFTRYGLGSDDEDEDEAGAPPAVEED
EEQEEEPSVHETEGSETESETASEPEFEHRLVPVAKSTTPEAPRNSNRHGPFAATIGLDP
RKVQVMQASMFHNDPGPEVTRSRSAFLARDVLPETVDKVAPIPKPKPKPKPEPQPLRKYE
RVPNEKSVTKSFSGAYMDAGLALGRSFRVSWGPNGELVHIGKICGTATKDSLPSSPSIVN
LSRVPLLSNPDDIEVIRANKLLEYQIKNSDVDLDDQGVPVATPNEDIRFHHVADLFGPDD
RSHESSVWRLGAALFDEINIRLSQGVASNIREQITSMRRRHALEKWLQTTVAPSVEFDLR
ELSGTSAANRAFLMLTGNQIARATDATMEANEMHLATLISQIGGDAEFRNDIESQLAKWK
EQKIDAHIDVWVRKIYALLAGIVGSVEGSKSRDPAEKSSDIVVAESLDWKRAYGLHLWFG
GSFNSPIVDSLESYETACNSASLATAHPHPWYIERPASVDSDALRWIVSGESVPKDALFE
IIKLAMDDTVPLDVALYPRAFGPSPIDYRISWHVYMLLARVLRERDVSDRSLVEEEGEEE
PQLSYSHKADAITSNYASQLENLGLWWYSIFVLLHLQESDGRLIAIKALLARHVSELDEE
KEEFLVNQLCIPQDWIEEAKAIISQYTNQSYQAFEFFVAAGQVKPAYDMALRDLAPEAAI
RNDFDLLISLFADKGFESLDDWTFRGQLYLQYAECMSKLPELLFDAAIGEPDAIQAIELE
RLSREHSPANLLGNMISSLMQFLPALKHRGMNIRPQLQSTMVEESVRLEHIQAMAHERFM
TAIETLG
NT seq 5244 nt   +upstreamnt  +downstreamnt
atgttcggttcgtcatggggtcagaacaaccaaaaccaacaaaatcaggcgcagcaagga
actgggctctttggccagcctgcgcaacagccgcaacagcaaccacagcaagggggtgca
tttggtaatacagggttcggttccgccggattcggccaacagcagcagcaacagcctggg
cagacgggcagcatttttgggcagccccaacagcctcagcagaaccaacaaccaggattc
ggcgcgtttggaggcggatccaacacaaccagcacttttggacaagccaaaccatttggt
tctactggctttggaacaactaatacgaccgcgacaacggcgccttcgttttccttcaca
ggcactagtaatccaacgcccacgaatgcatttggaaccaacactactgggggatttgga
actcagaaccaaacaccaacgagcacctttggacaaccctcgactagcacttttggtggt
ggaacaactgggtttgggtccaatactgggggagcctttgggtctactaacacaacaagt
acgtttggaactgccactaataccggtggtgggatgtttggggccccgaaacctgcaacg
ggaggcctctttggagcagccaccacaacaacgaatgcagcaggccaaggaacagcatcc
cctgcatatcaagccacccaagaacgtgatacggctgtgggaggaagctcaacgacgctt
cattatcagagtataactgctatgcccgcatatcgcaatttttcgtttgaagaactccga
gcccaagattatgctgcaggtcgtaagaactcgacttcaacaggttttgggacgtctgcc
tttgggtcggccaccaacacaactgccccctcgaccggtctgttcggtcagcctgctcaa
cagaaccagccccagcaaacaggcatctttggccaaccagcacaacccgcgcaatcgaca
ggtttattcgcagccatcgactgggctatttggccaacctgccagcaatactgctacgac
tggaacgggttgtttggccagcaaacgaacaccactacgggtgcatttggcagcaatacc
ggaaccactagttcgtttggtggtggagggttgttcggtgcaaagcctgctacgactgga
gcatttggtgcagccactactcagccgtccacaggattcggcacatttggtcaaaataac
caacctcagactggccagactacgagtatttttggtcagccacaacagaatcagcaacag
cctgcgaccgctgggttcgggtttggcacaaacaacaccgcaaataaacctctgttcgga
caacccgcggcgcagacgcagaccacaggtttgttcgggcagccagctcagcaaaacact
ggcgctggcttgtttggacaaccggcacagaacactgcggctgcccaacctgcacagacc
ggtggtttattcggcggctttggacaaaaccaacaacaggctcaacctgcccaaccttcg
acaggattgtttggtcaaccagcccagacgcagcctgcggcgacgacaggaactggattg
tttggtggtggaggcggactcttcggtcaaaacaaccagcagcagcaacagcagccagct
acttctctttttggaaaacctgctggtaccactggtggtttgtttggtggcactactacg
gccgctcctgccacaagcggtggtctgttcggaagtactaacgcagccaacactcagcag
ccagccactggtggtttattcggccaggcaaacaagtccatcttcggttccactcctgtc
gccaaccctgctcaacagacgtccatctttggccagtccgtgcaacccgcctcccagcct
tcgctttctgcgtcgatcgaccaaaatccatttggcagcaaccccttgttcgcgaacctc
ccaccaggcccccacgtgttctccgtttcccagaaccaggccaagaaaccactcattagc
gtatcccctcgcaagaatttctatcgcccaagcacgcctcaattgactaagcttcgaggg
tttgcgacccccctccgtccgcatcggttgatgctagcgttaatccctttactcggacaa
tctccatctctcactgctagtttaagcgataaccgatctttaggaggccgttcgagtgtt
aagaagctcgtcttggataaagacgtcaacgcatctgacctgccatcatctggatctttg
tttgctgctgctgctggcactcggtctactccttcaaagagcaaagtggtattccaccct
gatcttgtacagcgtgctgttgctggtgatggcttgtttaactcgaccgtttctcgcaca
gccgtgactgctcgtgcatcaatcgaccttggtccttcacattcgtactctgccaatgca
cctgtacgagaggaatcaactgtacgagacgataccccggctgctaccgctaccgacggc
gactattggatggtcccatcacttgctgagcttcagggcatgatggatcttacgaccgta
tatgccatctcagatatccccgaaaagactgttctctttgaagaaggcgcatgcacggtt
tatcccgacgagtctcaaaaagctgctcgcggcgaagggctcaacgttcattcggagatt
agtttggagaaatgctggccaagagacaaggccacccgtgcacccatcaagaacccgaac
gaccccgcgtggcagagacaggaacgcaagttgcgtaagatgaaggataccgagtttatt
tcgtttgaacccgagagtggagtgtggactttccgagtaccacatttcacgcgctatggg
cttggaagtgatgatgaagatgaagacgaggcaggcgcacctcctgccgtagaggaagac
gaagaacaagaggaagaaccttcggttcacgagacagaagggtccgagaccgagtctgaa
actgcgtctgagcccgagttcgagcatcgtctcgttccagttgccaaatctactactccc
gaggcacctcgcaactcgaaccgccatggcccgtttgcagctacgatcggtctcgacccg
cgcaaagttcaggttatgcaagcctcaatgtttcacaacgatcctggcccagaggtgact
cgcagccgttccgctttcttggctcgtgatgttctcccggagactgtagacaaggtcgcc
cctatcccaaagcccaaacccaagccgaagcctgagccacagccactaaggaagtacgaa
cgtgtgcccaacgaaaaatccgtgaccaagtccttttctggcgcgtacatggatgcgggg
cttgcactcgggcgatctttccgtgtaagttggggtccgaacggcgaactcgtgcatatc
ggaaagatttgtggtactgccactaaagattctttgccttcgagtcccagcatcgtcaac
ttatcaagagttccgctgctcagtaaccctgacgacatagaagttatacgagccaacaag
ttattggaataccagatcaagaactccgacgtcgatctagatgatcaaggtgtgcccgtc
gccacccccaatgaagatattcgcttccaccacgtggctgacctcttcggcccggatgat
cgctcgcatgagtccagcgtttggcgccttggagctgcactctttgacgaaattaacatc
cgtctctcacaaggcgtcgcttctaatattcgagagcaaattacctccatgcgtcgccgc
catgccttggagaaatggcttcagacaacggtggctcccagtgttgagttcgacttgcgc
gaattgagcgggacatccgctgctaaccgcgcattcctcatgctgacgggaaaccaaata
gctagagcaactgacgctacgatggaagcgaacgaaatgcatctcgcaacgctgatatct
cagatcggtggagacgccgagttccgaaacgatattgaatcccagttggctaaatggaag
gaacaaaaaatcgatgctcacattgacgtctgggttcgaaagatttatgcactgctcgct
ggaattgtgggcagtgtggagggttccaagagccgcgaccctgccgaaaagtccagcgac
attgtggttgccgaaagcttggactggaagcgtgcgtatggattgcacctgtggtttggt
ggatccttcaactctccgattgtcgactctctggagagctatgaaacggcatgcaacagc
gcttcgcttgctaccgctcatcctcacccttggtatattgaacgacctgcgtctgtcgat
tccgatgctctcaggtggattgtatctggcgaaagtgtacccaaagatgctttgtttgag
attatcaaactggccatggacgacacggtgccacttgatgttgctctctacccccgcgca
tttggacctagccccattgactataggatttcttggcatgtttatatgctactcgcgcgt
gtccttcgggaacgagatgtgtccgatcggtcgctcgttgaggaagaaggcgaggaagaa
cctcagttatcttatagtcacaaggcagatgctatcacatctaattatgcctctcaattg
gaaaacttgggattgtggtggtattccatatttgtattgctgcacctacaagaatcggac
ggtcgtttgattgccatcaaggccctgctggctcgacatgtctctgagctggatgaagag
aaagaagagttcctcgtaaatcaactctgcatacctcaagactggattgaagaggccaag
gcaattatctctcagtacaccaatcaatcctaccaggcgttcgagttcttcgttgctgcc
gggcaggtcaaacctgcatatgacatggcccttcgtgatctcgcacccgaggctgccatt
cgaaacgactttgatttactcatttccctcttcgcggacaaaggattcgagagtttggac
gattggaccttccgtggccagctctatctccagtatgcagaatgcatgtccaaactccct
gagctgttatttgatgcggctataggagaacccgacgcgattcaagccatcgaactagag
cgcttgagccgcgaacattcgccagcaaatttgttgggcaacatgatttcgtccttgatg
caattcctacccgcgctcaaacacagaggcatgaacatccgtcctcaactccaatccacc
atggttgaagaatcggtccgcttggagcacatccaagccatggctcacgaacggttcatg
accgcaatcgaaacgctaggctaa

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