KEGG   Rhizoctonia solani: RhiXN_00319
Entry
RhiXN_00319       CDS       T09256                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
rsx  Rhizoctonia solani
Pathway
rsx03020  RNA polymerase
rsx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RhiXN_00319
  09124 Replication and repair
   03420 Nucleotide excision repair
    RhiXN_00319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsx03021]
    RhiXN_00319
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_00319
Transcription machinery [BR:rsx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     RhiXN_00319
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      RhiXN_00319
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L Rio2_N
Other DBs
NCBI-GeneID: 67022601
NCBI-ProteinID: XP_043179150
LinkDB
Position
4:complement(join(1054651..1054954,1055028..1055117,1055168..1055220))
AA seq 148 aa
MNAPNRFEMFTLADGERLIEVIEDTKIPNAATFKIVKQDHTLANMLRAQLLSNEAVIFAG
YKVPHPLEPYFIIKVQTNGAFTPTQVLLDACSALIRMISDIKQQFTTKFDLRALESDAGE
EISGPYGTSRYGGYGAEASRPGGDYMDM
NT seq 447 nt   +upstreamnt  +downstreamnt
atgaatgccccgaaccgattcgaaatgttcaccttggccgatggggagcggctcatcgag
gtaatcgaggataccaaaattcccaatgcggcaacattcaaaatcgtaaagcaagatcac
accttggccaacatgcttcgcgcccaattgctttccaacgaagccgttatattcgcgggt
tacaaggttccacacccgcttgagccctattttatcatcaaggtccagaccaatggagcg
tttacacccacccaagtgctcctcgacgcgtgtagcgcgcttattcggatgattagtgat
atcaagcagcaatttaccaccaagttcgatttgcgtgctttggagagtgacgcaggagag
gaaatatcgggaccatatggcacatcgagatatggtggctatggtgcagaagcatctagg
cctggtggtgattacatggatatgtag

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