KEGG   Rhizoctonia solani: RhiXN_00377
Entry
RhiXN_00377       CDS       T09256                                 
Name
(RefSeq) nucleoporin-interacting protein NIC96
  KO
K14309  nuclear pore complex protein Nup93
Organism
rsx  Rhizoctonia solani
Pathway
rsx03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    RhiXN_00377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_00377
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     RhiXN_00377
SSDB
Motif
Pfam: Nic96 ABC_tran SMC_N AAA_21
Other DBs
NCBI-GeneID: 67022659
NCBI-ProteinID: XP_043179208
UniProt: A0A8H8SUI7
LinkDB
Position
4:complement(join(1189883..1190000,1190079..1190175,1190239..1190330,1190391..1190686,1190740..1191004,1191055..1191325,1191370..1191504,1191556..1191678,1191731..1191994,1192053..1192224,1192275..1192293,1192357..1192763,1192839..1192986,1193051..1193125,1193161..1193261,1193311..1193505,1193557..1193937,1193986..1194242,1194292..1194415,1194486..1194789,1194841..1195004,1195053..1195415,1195466..1195615,1195665..1196025,1196089..1196252))
AA seq 1681 aa
MAEDLGAILATSRGLVAHLPRPDLPSINLSLDQIEAQSRRLVSKQPTAPGTGGKATYLLA
GGNVDANAHADLVANLNTAATFAPLTQLHDADVSGYLRHSHEQTLIACIEEGRRETEQEF
YRVLDERVRRDWETRKKKIFDELGKVNPAENVTAGGASNLRASAMGRTVRGSGTNAVSQP
TTSLPMYNKMAAYGEVIRGLNQARLAGTAYPVVSHLYHVAQEYAGSAPSIGPTLELLRHI
VAEPPSLTLPSSHSQAHILNTPLLERSFARAHLGNPESQAATELRTRIANGARAGLEKQY
IEYVDAAIQREPANAAIGGDPSIQNRIMGYLRCKFYRSGRWNEDLELLRGRPVWAHIFFL
IRTGHLREALDVANESADPIERSEQYFLSYLKAWVESSDRRLPKMLRDRLQTTYNSHILH
SPNADPFKVALFKLIGRLDPTRRAVRSAIVTAEDWIWFQLAMVDEEEGNGLRELGKVLEG
YGEKHFEGTGPGRRGMWARVLMAVAALYEHPDHRIEAVHIAVALAYYGLLRVPSTSEASQ
VDILTSMPFQPPALNLALLITRYIKPFMTSEPKPAVQYAYCISLSHDQEKNVGKEQVDYA
RELTRRIIVAAPAGWEDLVGGLRPDGTRYSGVVEHDMPLLHLKSAEEYRDIIVLPAAQLC
ENDHKLIAAIRLYNLAGKSNIVLSCLNRALGESLGEVDAGGEAAKELETSARQILAHYER
RGETLDQGQVRIIRKLLKARQAITLSMTGDLEGALAALDNPDLLPLDAETSTIARRAEEF
RDQDDALTHNIGHLLILAMTILHQIHSQAKGAQFGDTGKQSTLNIVKKKTRALISFAGML
KYRLSADIFGQLTRIFSIFNYMADMTPDLNTNGRALPFVVTTTGRVYRGSKLAGLFKTNT
SSKSAINDPLRTVFAWLPSTRFVTADSPGLFYYSLLYFYPSFLNLNMESESQLRFRGPPP
GPTPGPPPDINESKASPLHPPNNLSGAPQPDTPISPTSEQGFDPTNPTTSNYVNLGVWDY
YEERAPKLNRVPLVKIYRRITQGLSGAPFAWRLMKDVVRLAPVLVSRMFQVIKDAVEKRN
VDSSLLIKIAVARGLATFVQRACGYAIQILAPTISLRVRGFFAEYILQAHARLDVPTFDD
NEVRSLLETVASDRSGAWEALVDSFNIGSTFLELFTQALVLFGIIMESNDSLLLVALSLI
GPVTTWWIRPIRRPEGAWVAKVNNEDYVRMQGLKKVATERNHRKELVAGNLQEYISQQYH
AARASVGDNAQDFWEARRYMQTKKAGNPISLVMPLFRDLPQANHICTPSHPYPRFNPAFA
RPTRSGPTKRDSFSEQLENFSHIIEGIAYSFQSIESLYSIIDIPNHIPDAPPDALPLTLP
LDQKVKGLGIEFRNVSFKYPGTSKYVIRNMSFTIKPGQLCVIVGENGAAKSTSLKLILRL
YEVDEGEIFIDGRDIRTIPLKSLRQCASVLFQDFSNFHSRSIRENIAMGSPLHAQDNGRI
EEAARLGGASQFIDTLPEQMETYLSRPVHDMAGGLGFGQHTLLGRQFNTSRGGWGRKGGK
RGGRAQDMEVSGGQQQRLALSRAFMRSNDENVRLWMFDEPSASLDPLAEFNLFERLRDMR
GTNTMIFSTHRYGGLTRYADLILYLKDARVAEMGTHDELMGRNGDYAQLYNVQAQAFRQD
T
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggctgaagatcttggtgctatcctcgccacgtcccgtggacttgtcgcacacctccct
cgacccgacctcccatccattaatctctccctagaccaaattgaagcacaatctcgacgc
cttgtgtcaaaacaaccaactgcgcctgggactggaggcaaagcgacataccttcttgct
ggaggaaacgtcgacgcaaatgctcacgccgacttggtggcaaacctaaacacggctgca
acgtttgctcctcttactcaattacatgatgctgatgtgtctggatacctacgacactct
cacgaacaaacgctgattgcatgcatcgaagaaggaagaagagagaccgagcaggagttc
taccgggttctagacgagcgcgtgcggagagactgggagactcgaaagaagaagatattc
gacgagctaggcaaagttaatcctgctgaaaacgtgaccgcaggaggtgcaagcaacctc
agagcgagcgcaatggggcgtactgttcgcggatctggtaccaatgccgtatcgcaacca
accacttcgttgccaatgtacaacaaaatggcagcctacggagaagttattcgtggactc
aaccaagctcgcctggctggaacagcatatcctgttgtctcacatctttaccatgttgca
caagagtatgctgggtctgctcccagcattggccccacattggaacttctgcgccacatc
gttgccgagcctccctctctcacacttccctcatcacactcccaagcgcatatccttaat
acgcctctgttagaacgcagcttcgctcgggcacacctcggtaatccagaatcacaagcg
gccacggagctcaggacacggatcgcaaacggagctcgcgctggcttggaaaaacaatat
attgagtatgtcgatgctgccatacagcgagaacccgcaaatgccgcgattggaggggat
ccaagcatccaaaaccgtattatgggttatttgcggtgcaaattctaccgcagcgggcgc
tggaatgaagaccttgagttgctccgggggagacctgtgtgggctcatatattctttttg
attcgtactggtcacctccgagaggctcttgacgtcgcaaatgaatctgccgacccgatc
gagcgaagcgaacaatacttcctttcttacttgaaagcttgggttgagtctagcgacagg
aggttacccaaaatgcttcgtgaccgactgcaaaccacatacaactcgcatattcttcac
tcccccaatgctgatcccttcaaagttgcactattcaagcttattggccgactggacccg
acccgtcgtgcggtgcgcagcgcaatcgttactgcagaggactggatttggttccagctt
gcgatggtcgatgaggaagaaggaaatggtctgcgcgaacttggaaaagttcttgagggt
tatggagagaagcatttcgaaggcacaggtcctggccgccgtggaatgtgggctcgtgtg
ctgatggcggttgcggctctgtacgagcatcctgatcatcgtattgaagctgtccacatt
gcagttgcactagcttactacggtctgctaagagtaccatccacttctgaggcatcacag
gttgatatcttgacatctatgccattccaaccccctgcgttgaatctggctttgttgatt
actcgctatatcaagccgttcatgacgtccgaacctaagccagcggttcaatacgcgtac
tgcatatctctcagccatgatcaagagaagaatgtgggcaaagagcaggtggactacgcc
cgagaattgactcgccgtatcattgtggctgcccctgcgggctgggaggatttggttggt
gggctccgaccagatggaacacgatactctggagttgttgaacacgatatgccattactc
caccttaaaagcgccgaagagtaccgcgatatcattgtcctgccggccgcccagctctgc
gaaaacgatcacaaacttattgctgcaatccgcctatacaaccttgccggcaagtcgaat
attgttctcagctgcttgaatcgtgctctgggcgaatcgttgggtgaggtggatgcgggc
ggagaagctgcaaaagagctcgaaactagtgcaagacagattctggcccactacgaacga
cgtggagagacactcgatcagggccaagttaggatcattcgcaaacttctcaaggcccgc
caggctattacactcagcatgacgggagaccttgaaggcgctcttgcagcacttgataac
ccggatcttttgccgctggatgcagagacttccactattgcacgccgtgccgaagaattc
cgagaccaagacgacgccctcactcacaatattggtcacctattaattctggccatgacc
atcttgcaccagattcactctcaagccaagggtgctcaattcggcgatacgggcaaacag
agtacgctcaatatcgtcaagaaaaagactcgtgcattaatttcctttgctggaatgctc
aaatatcgcctgtcggcagacatttttgggcaattgacgcgaattttctctatatttaat
tatatggctgacatgacacccgacttgaatacgaatggacgtgctctgccttttgttgtg
accacgaccggccgcgtgtatcgaggatccaaacttgctggccttttcaagacgaacacg
tcttcaaagtcggccatcaacgatcccttacgtaccgtctttgcctggctgccttccact
aggttcgtgactgcggattctccaggcttgttttattattcgctactgtatttctatccc
tcatttctcaacttgaatatggagtcggaaagtcagctccgtttccgaggaccacctcct
ggtcctacacccggcccacctccagatataaacgaatcgaaggcatctccactccacccg
cctaataacttgtctggcgctccccaaccggacaccccaatatctcccacgagcgaacaa
ggctttgacccaaccaaccccacgacaagcaactatgttaatcttggagtgtgggactat
tacgaggaacgggctcccaagcttaatcgtgtaccactcgtcaagatttaccggcgcata
actcaagggcttagcggtgcaccatttgcgtggcggttgatgaaagacgttgttcgactc
gcacctgtgctggtctctcgaatgtttcaagtgattaaagatgccgttgagaagcgaaac
gtagattcgagtttgctcataaaaatagctgttgcaagagggctagcgacctttgttcag
cgcgcttgcggttatgcaatacaaatactggcaccaactattagcttgcgtgttcgaggc
ttctttgctgaatatattctacaagctcatgctagattagatgtaccgacatttgacgat
aacgaagtccgcagtctgctagagacggtggcatctgaccgttcgggcgcctgggaagct
cttgtggatagttttaatattgggtctaccttcctcgagcttttcactcaagcccttgtt
ctttttggtattatcatggaaagtaacgatagcttgttactagttgctctaagccttatt
ggtcccgttacgacgtggtggattagacccatacgacgacctgaaggagcttgggttgcc
aaagtaaacaacgaggactatgtgcgtatgcagggattgaagaaggtggcgacggaacga
aatcatagaaaggagctcgttgcgggtaatctacaggagtatatttcccaacaataccac
gctgctcgagccagtgttggtgacaatgctcaagatttctgggaggcacgtcggtacatg
cagaccaagaaagctgggaacccaatttcattggtcatgccactcttccgggatctcccc
caggcgaatcatatttgcactccgagccatccatacccccgtttcaatcccgctttcgct
cgcccaactcgatctggtccaacgaaacgtgactcatttagcgagcagcttgaaaacttt
tcacatatcattgaagggatcgcatacagtttccaatctatagaaagtctctattcgatc
attgacatccctaatcacatacccgatgctccaccagatgcattacccctaacactacca
ttagaccaaaaggtcaaagggttgggtattgagtttaggaatgtatccttcaaataccca
ggaacctcgaaatatgtgatccgaaacatgtcttttacgattaagcctgggcaactatgc
gtgatcgtaggcgaaaacggcgcggctaaatccacgtcgctcaaactcatcctgagacta
tacgaagtcgacgagggcgagatcttcattgacggccgagacatccgcaccatcccgctc
aagagtctccgacaatgtgcatctgtgctcttccaagacttttccaatttccactctcgg
tcaattcgagaaaacatcgcaatgggatctccattgcacgcgcaagacaacggccggatc
gaagaagccgctcggttgggaggggcatcccaattcattgatacactgcccgagcaaatg
gagacgtatctctctcggcccgtgcacgacatggcaggtggactcgggttcggccagcac
acgttgctcggtcggcaatttaatacgtcgaggggtggatggggtcggaagggtggaaaa
cgaggcgggagggcacaggatatggaagtttcgggtggacagcagcagagattagcttta
tctcgcgcattcatgcgttcaaatgatgagaacgtccgcttatggatgtttgacgagcca
tccgcatcgcttgacccactggccgaattcaatttattcgaacgtcttcgcgacatgcga
ggcacgaacacgatgattttttccacgcatcgatacggggggttgacccgctacgcagac
cttattctgtatctcaaagacgctcgggtcgctgagatgggcacgcacgacgagctgatg
gggcgtaatggagactatgcacagctgtacaatgtccaggctcaggcatttaggcaggac
acgtag

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