KEGG   Rhizoctonia solani: RhiXN_00588
Entry
RhiXN_00588       CDS       T09256                                 
Name
(RefSeq) Elongation factor Tu GTP binding domain
  KO
K14416  elongation factor 1 alpha-like protein
Organism
rsx  Rhizoctonia solani
Pathway
rsx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    RhiXN_00588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_00588
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     RhiXN_00588
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C HBS1_N GTP_EFTU_D2 GTP_EFTU_D3 MMR_HSR1 GTP_EFTU_D4 ProQ_C
Other DBs
NCBI-GeneID: 67022870
NCBI-ProteinID: XP_043179419
UniProt: A0A8H8SW60
LinkDB
Position
4:join(1815814..1815826,1815874..1815918,1815968..1815991,1816044..1816181,1816236..1816274,1816376..1817124,1817324..1817594,1817643..1817808,1817857..1818121,1818181..1818370,1818430..1818606,1818660..1818750,1818804..1819013,1819068..1819233)
AA seq 847 aa
MNIHDELAEDDVSDTYDEDEEMTNEQKDQMAVGLAQVRSVLGEKDASGVDDKQIKDALWD
SYFDVEGTISWLLDQRAKEAAAAAKKAITVDSEHAYTLVPDQDEAIQLPLSALQRLALQR
RQAGSSSASHTTDKPSGLAGLAKGLSKKSLSVGPPLSATPTPANPPPKSSKLSALAQKSA
SLRANPVAKPPAPQTNTPTNMPLSKLALRIKAQKDAQEAAAQPQVKIDPHELELDTQPFK
PEFERFGNLRPNDPYIAADPQVALLRKLRTGPSLFGDILASRQDSTNVAVSLAQVYSGIV
SGPPSAFQFNTPSPDDAVMAAREGTRLNAYKKASGIPPSNKATPKTAPSQRPSGSKKQLE
QETTQNADTLDMDMAGLNIVKPQDSQPEEEAPPKISIARERILEEARKEATSGDSDGRKR
LSLVVIGHVDAGKSTLMGRLLYECGQVEEKRRREHERASEKAGKASFSWAWELDAGAEER
ERGITMDIAQSVLPTEHRIISILDAPGHKDFVPNMISGASQADCALLVVDAATGAFEKGF
EGGGQTREHIGVVRSLGVRNIVVAVNKMDMVDYRKSRFDEIQVALLPFLVQAGFNTSRVT
FVPCAGVSGVNLTKSEEPALQSWWDGKPIVDHLDRLEPPIRDFDTPLRIPISNVFKGVTS
SGIGISGRISGGIVQVGERVRIVPGDETAVIKSIEKDDVNVQWAAAGSNVTIYLANIDPI
HLSIGSVLCSPGDIVPLASSFNAQIIVFDIQLPIIGGSSVELFHHSREVPASVSKLIETV
DRATGAVIKRNPRVLPKSSSAKVTISLRVSSGPSARPASIPLEPFSVNKEMGRILLRRGG
ETIAAGE
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgaatattcatgatgagctcgctgaggatgacgtttccgatacctatgacgaggatgag
gaaatgaccaacgaacagaaagaccaaatggcagtagggttggcacaagtccgctcagta
ttgggcgagaaggatgcatctggagtggatgacaagcaaatcaaggatgcactatgggat
tcttactttgatgtagaggggacaatttcttggctgttagaccaaagggccaaggaggct
gctgctgccgctaaaaaagcaatcacggtcgattctgagcatgcctacaccttagtcccc
gatcaagatgaagctatacaactacctttatccgcccttcaaagacttgcgttgcagcgc
cgacaagctggatcgtcttcggctagccacaccaccgacaaaccaagtggacttgccgga
cttgccaaggggctctcaaagaagtccttgagtgtcgggccgcctttaagcgctacccct
actccagccaaccctccgcctaaatcatccaaactctctgcattggcccagaagtcagct
tcactaagagccaatcctgtcgcaaaacccccagcgccacaaaccaataccccgaccaac
atgccactttcgaaacttgcgctacgtatcaaggcacagaaggacgctcaagaagcggca
gcacaacctcaagtcaaaatagatccacatgagctagaacttgatacacaacctttcaag
cctgaattcgagcgctttggcaatttacgacccaacgatccttacatagcagcggacccc
caggtagcccttctgcgcaaacttaggactggcccatctctcttcggggacattctggct
tctaggcaggactcaaccaacgtagcggtctcgttggcgcaagtttactctggcatagtc
tctggacctccatcggcttttcagttcaatacaccttctcctgacgatgcagttatggcc
gcacgagaggggacgcgcctgaatgcctacaagaaggcgtctggcatacctccatcgaac
aaggctactcccaaaacggcaccttcacagcgtccttccggttcaaagaagcaattggaa
caggaaacaacgcaaaatgctgacacattagatatggatatggccggtctcaatattgtc
aagccacaggactcgcagcccgaagaggaggctcctcccaagatatccatcgctcgggag
cgaatacttgaagaggctaggaaagaggccacttcaggggattcagatggacggaagcga
ctaagtttggttgtaattggacacgttgacgccggaaagtcgacattaatggggcggctt
ttgtacgaatgtggccaggttgaagaaaaaaggcggagggaacacgagcgcgccagtgaa
aaggctggaaaggcaagttttagttgggcatgggagcttgacgcaggggcggaggagcgt
gagaggggtattactatggacattgctcagtccgtacttccgacggagcatcggataatt
tcaattcttgatgcgcctgggcacaaagatttcgtgccaaacatgatctcgggcgcatct
caagcggattgtgcccttttagtagtggatgccgcaactggagcttttgaaaaaggcttt
gaaggaggcggacaaacccgtgaacatattggggttgtccgcagcctgggtgtaaggaat
atcgttgttgctgtaaacaagatggatatggttgactatcgaaaatcaagatttgacgag
attcaagtcgctttacttcccttccttgttcaagcagggttcaatacatctcgcgtcaca
tttgttccgtgcgcgggtgtctctggtgtcaatctaaccaagtcagaggaaccagcattg
caatcatggtgggatggtaaaccgatcgtcgatcacctagatcgacttgaacctcctatc
cgagattttgacacacctctccgaattccgatatccaatgttttcaagggggtgacttct
tctggaattgggatatcgggtcgcattagtggcggaattgtacaagtgggagaaagagtt
cggattgttccgggcgacgagacagcggtcatcaaaagtatcgagaaggacgacgtcaac
gtacagtgggccgcagctggatccaacgtcacaatttatctggccaatattgatccaata
cacctcagcatcggctctgttttatgctcgccgggtgatatagtaccattggcttcttcg
ttcaatgctcaaataatcgtattcgacattcaattgcctattattggtggctcttctgtt
gagctattccatcattcgcgcgaggtaccggcctcggtatcgaagctcatcgagacagtc
gatcgggccacgggtgcagtaatcaagcgaaatcctcgcgttctcccgaagtcgagctcg
gccaaagtaaccatctctcttcgggtttcttctgggccatccgctcgaccagcctccatt
cctctggagcccttttcagtaaataaagaaatgggtcgtattttgcttagacgcgggggt
gagacaattgctgcaggcgagtaa

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