Rhizoctonia solani: RhiXN_00749
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Entry
RhiXN_00749 CDS
T09256
Name
(RefSeq) Serine/arginine repetitive matrix protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
rsx
Rhizoctonia solani
Pathway
rsx03013
Nucleocytoplasmic transport
rsx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
RhiXN_00749
03015 mRNA surveillance pathway
RhiXN_00749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_00749
03041 Spliceosome [BR:
rsx03041
]
RhiXN_00749
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
RhiXN_00749
Spliceosome [BR:
rsx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
RhiXN_00749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
67023031
NCBI-ProteinID:
XP_043179580
UniProt:
A0A8H8NVY4
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All DBs
Position
4:complement(join(2255139..2255141,2255195..2255471,2255521..2255708,2255764..2255862,2256022..2256156,2256219..2256449,2256524..2256727,2256787..2256828))
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AA seq
392 aa
AA seq
DB search
MADAGFFKGTSAEQDRRFADKEHRLLKSIKFPPEFDRKVDMRKVELSVMRPWITKKVVEL
VGFEDEVVVEYVMGLLEDRSKPPDPKVMQINLTGFLESKTPAFMSSLWALLLEAQDSPAG
VPASFVQEKKEELRQKHEADERALAEARRRGEHDLRLDEIRQRERGERRGRGGGRGGGDS
FRGRGRDSGWGNRGGGGGGGGRGDVRHVAAPYLEVEAGPRLHGGGTGALLPPDLHPQTLS
LTPWCQAFTFPERKQALHNPSSSWRRKETFSLSSPLAIKDSIREIEERISTPKAKGFARS
DDTPPRRRDGSSRRRDSSPRRRDDSRKRGDSPPPPPSRRRDSPRRTTSRSPSPNARKRQR
SEPGVDVEPLSIKGAASGKKSRWGEGQDEKDD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgctggattcttcaaggggacgtctgccgagcaggatcggcgcttcgccgat
aaagaacaccgtctactcaagtcgatcaagtttcccccagagtttgaccgtaaagttgac
atgcgcaaggtcgaactctcggtcatgcgcccgtggataacgaaaaaagtggtcgaactc
gttggatttgaggacgaggtcgtggtcgagtatgtcatggggcttttggaggaccggtcg
aagcctcccgacccaaaagtcatgcaaattaaccttactgggttcttggaatccaagact
ccggccttcatgtcgtcgctctgggccctcttgcttgaagcacaagattcccccgcagga
gtccccgcatcgttcgtgcaagaaaagaaagaagagctcagacaaaagcacgaggccgac
gaacgggctcttgcagaagccaggcgtaggggcgagcatgatttgcgtctggacgagatt
cgtcaacgcgaaagaggtgagaggcgcggccgaggcggtgggcgcggtggaggagactcg
ttccgtggtagaggtcgcgactcgggatggggtaatcgtggtggcggtggtggaggtggt
ggacgcggagacgtccgccacgtcgccgctccatatctggaagtcgaagcaggtccccgt
ctccacggaggcggtacaggcgctctccttcccccagatctccatccccagacgctctcc
ctcaccccgtggtgccaggcgttcaccttccccgagaggaaacaggcgctccataacccc
tcctcctcgtggaggcggaaggagacgttctccctatcgtcgccgctcgccatcaaggac
tccatccgcgagatcgaggagcggatctccacccccaaagcgaagggattcgcccgttca
gacgacacaccacctcgtagaagagacggttcttcacgcaggagagatagttctccgcgc
agaagagacgattctagaaaaaggggcgattcgccaccgccgccaccgtcacgcagacgg
gactcgccccgtcgaacgacttcacgttcaccttctcccaacgcacgcaaacgccaaaga
agcgaacctggagtcgatgtcgaaccgctgagcatcaagggagctgcatctgggaagaag
agtcgatggggcgaggggcaggatgagaaagacgactaa
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