Rhizoctonia solani: RhiXN_00823
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Entry
RhiXN_00823 CDS
T09256
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_00823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_00823
03032 DNA replication proteins [BR:
rsx03032
]
RhiXN_00823
Spliceosome [BR:
rsx03041
]
Complex A
U1 snRNP components
Sm proteins
RhiXN_00823
U2 snRNP components
RhiXN_00823
Complex B
U1 snRNP components
RhiXN_00823
U4/U6.U5 tri-snRNP components
RhiXN_00823
Complex C
U2 snRNP components
RhiXN_00823
DNA replication proteins [BR:
rsx03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
RhiXN_00823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
67023105
NCBI-ProteinID:
XP_043179654
UniProt:
A0A8H8NVA5
LinkDB
All DBs
Position
4:join(2498050..2498197,2498289..2498443,2498497..2498517,2498573..2498649,2498707..2498726,2498777..2498796)
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AA seq
146 aa
AA seq
DB search
MDDASFSTSLALGGESSNSRRVPHAKGPLTPLALSTLTSTCPKSTQNEAPEIRQLEEHEI
SQGPLSVLQQSVRNHTQVLISLRNNKKLLARVKAFDRHSNMVLENVKEMWTETQKGKNGK
TVNKDRFISKMFLRGDSVILILRNTA
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgcctcctttagcactagtctggcgcttggaggcgagagttcgaattcgagg
cgcgttccacatgcgaagggacccctgacacccttagcactctcgactttgacctccact
tgcccaaaatcaacacaaaatgaggcaccggagattcgtcaattagaggagcacgaaatt
agccaaggaccgttgtcggtgttgcagcagtcggtacgcaaccacacccaggttttgatt
tctcttcgaaacaacaagaaacttcttgctcgagtaaaagcatttgataggcacagtaat
atggttctagaaaatgttaaagagatgtggactgagactcaaaagggtaagaatggaaaa
acggtcaacaaagaccggttcattagcaagatgttccttcgtggagattcggtcattctt
attttgaggaacactgcctga
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