KEGG   Rhizoctonia solani: RhiXN_00879
Entry
RhiXN_00879       CDS       T09256                                 
Name
(RefSeq) RNA recognition motif protein
  KO
K22611  squamous cell carcinoma antigen recognized by T-cells 3
Organism
rsx  Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsx03041]
    RhiXN_00879
   03036 Chromosome and associated proteins [BR:rsx03036]
    RhiXN_00879
Spliceosome [BR:rsx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    RhiXN_00879
Chromosome and associated proteins [BR:rsx03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    RhiXN_00879
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_occluded HAT_PRP39_N Nuc_rec_co-act RRM_Nup35
Other DBs
NCBI-GeneID: 67023161
NCBI-ProteinID: XP_043179710
LinkDB
Position
4:join(2627563..2627764,2627811..2627921,2627979..2628583,2628633..2628824,2628878..2628926,2628981..2629103,2629155..2629217,2629276..2629328,2629377..2629495,2629556..2629745,2629799..2630000,2630051..2630069,2630121..2630202,2630254..2630328,2630380..2630526,2630579..2630662,2630717..2630971,2631043..2631140,2631197..2631383,2631457..2631750)
AA seq 1049 aa
MSAMEEDTKDEGALLEQLSSVLTELQENPYDLAKHYEHIRLASSLPGMEEQAISAREMMI
ETWASSEDVWLPLLDHKIAAAGNLTTEGFNEITTWFEKAEADYFSIEILRKHMEFILNAS
TSGSDEIQAFLTRDTVRELLKEIVLKGSGHITKCNILWDKWIAWEMECFSDSSHTPEDVA
RVQATLLSRLHTPHSGLDNALQEYSTFVSTHLPDSSYEELLVAASKARSEPQKKFGWRER
WETSIQQAEDSPAIYAQYIDYEWRRPDPTFLVPLYERAIAATAARRMEPGGEETLQRFWA
GLYKAVQKSAEMRAKAMHIKRSKKKRDEDMDEEVLEDLEDIQVRATLVVMRAIRSVPFSS
SIWASHILNAGTSATNDATATMASVDVLTDRALTLLRLKGADSEAFVEVGLASADALKVR
LQTEDGADETIFGGIVTTLPKCIDAVRQASKDGDRLLRLEQYLYAAYTRLIQGADFGELA
VDLLKTTEEHYKGSYLACTLRATDLIQRGEVVQARDVYKRGASRPLDWPEQVWDNWILFE
HIFGDQSSLEAAQEVVDKQRAIVMKKRQKEAAKAAEAYAAANPVATTTETEAVEDQPQDE
NVMDVDEGIQDNRKRKAESPIIKRVAQEPTQKKAKADTTTLKRDRENSTVFVTDMPAGID
QEEIQQLFRDCGEIREIKIMQVESEPIVTVEFMDRESVPAALTKDKKRLNDTEISVHLAW
KSTLYITNFLESTDDAEIRKMFSPFGKILDVRWPSKKFKTTRRFCYLQYTSPAAAQAALS
LHNKELAPNQRMSVYISNPERKKERTDAGADQREIYIAGLSKLSTRADLEQLFGQFGAIK
EIRIATETDGSAKGYAFSSASQALSMNNHELKKRRIAVTIADSRVHAKHKNDEHAGLSRK
AEQRTRSLRVKNVPADATDGLLQQTFEKLAPVVSVQVQEGKGEAVVELKHASDVGKLLLL
TEPITFNGVALGLSEESASKAPSKPNAAFVPRAAGSRPRAGLGSKKAGIGAISASNPPPA
SVPASASAPSAGGSGKNQDDFRNMLLGKK
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgtctgccatggaagaagataccaaagacgaaggggcgttgcttgagcaattatcttct
gtgttaactgaactccaagaaaacccatacgaccttgccaaacattatgaacatattcgg
ctggctagttcgctccctggcatggaggaacaggctatctcagccagggaaatgatgatt
gaaacatgggcttcctcagaagatgtatggctacccttgctcgatcacaagattgctgcc
gctggaaatctaacaactgaaggctttaacgagataaccacatggttcgaaaaagccgaa
gcggattatttctccatcgaaatcctacgcaagcacatggagttcatcctcaacgcttcc
acatccggtagtgatgaaatacaagcgtttctgacacgcgatacagtccgagagctattg
aaagaaatagtactaaaagggtcggggcatataaccaagtgcaatattctatgggacaaa
tggattgcttgggagatggaatgtttctcggattcatctcatactccagaagacgttgca
cgcgtacaggccactctcctctcccgacttcatacccctcattctgggcttgacaatgca
ctacaagaatattccacctttgtttcaacccatctaccggattccagttatgaggagctc
ctagtagcagcaagcaaagctagaagcgaaccccagaagaagtttggatggcgcgaacga
tgggaaacgtccattcagcaagctgaagattctccagcaatttatgctcaatatattgat
tacgaatggaggcgacctgaccctacttttttggtcccattatatgaacgagcaatcgcg
gccaccgctgcgcgaagaatggagcctggcggggaggaaacactacagaggttttgggcg
ggattatacaaggctgtgcaaaaatctgcagaaatgagggcaaaggctatgcacatcaaa
cgttcgaagaaaaaacgtgatgaggatatggacgaagaagtattggaggatcttgaggat
attcaagtacgcgcaactctagttgtgatgcgggcgatacggagcgtcccattctcaagc
tctatctgggcatcacatatcttgaatgcaggtacatctgccacaaatgacgccacagcc
accatggcttctgtagacgtattaactgatcgtgcgttgacgctccttcgactaaaaggt
gccgatagtgaggcgttcgttgaagttgggctcgcaagtgcggacgcactaaaggtacgc
cttcaaacagaggatggagccgatgaaactatatttgggggtatcgttaccactcttcca
aagtgcatagatgcggttcgccaagccagcaaggatggcgatagacttttgcggcttgaa
cagtacctatatgcggcatacacaagacttattcaaggcgccgatttcggagaattggcg
gtcgatctattgaaaaccaccgaagaacattacaagggtagctatttggcatgtacattg
cgagccacggacctaattcaacgcggtgaagtggtccaagcacgcgatgtctacaaacgt
ggtgcaagccgaccgttggactggccagaacaagtgtgggataattggattctgttcgaa
cacatatttggggaccagtcgagtcttgaggccgcgcaagaggttgtcgacaagcaaagg
gcaatcgtaatgaagaagcgtcaaaaggaagctgcgaaagctgcagaagcttacgctgct
gccaatcctgttgctactaccaccgaaactgaagccgtcgaagatcaacctcaagacgaa
aatgtaatggacgtcgatgaaggaatacaagataatcgaaaacgcaaggccgaatccccg
atcataaaacgagttgcacaggaacccactcaaaagaaggccaaggctgataccacgaca
ctgaagagggaccgagagaatagtaccgttttcgtgactgatatgcccgcaggaattgat
caagaggaaattcaacaactcttccgtgattgcggtgagattcgagaaatcaagattatg
caagttgaaagcgagcctattgtgaccgtagaattcatggaccgagaaagcgttcctgcc
gccttgacaaaagacaaaaagcgactcaacgatactgaaatcagtgttcatctggcttgg
aaatcaacactgtacataactaacttcctcgagagtaccgacgacgccgagattcgcaaa
atgttttcaccgtttgggaaaattctcgatgtccgatggcccagtaagaaattcaaaacg
actcgtcggttttgctacctgcaatacacatcgcctgcagcagcccaagcagcgctctcg
ctccacaacaaagaactagcccccaaccaacgaatgagcgtgtatatctccaacccagag
cggaaaaaagaacgcacagatgccggggcagatcaacgtgagatatacatcgcaggtcta
tcgaaactttcgacccgtgccgacttggagcagctgtttggtcaatttggggcgatcaag
gagattaggattgctaccgagacagacgggagcgccaagggttatgcattttcatcggca
tctcaggcgttgagtatgaacaaccatgaactcaagaagcgtagaattgccgtgacgatc
gctgactcccgtgttcacgcaaagcacaagaatgacgaacacgccggtctatcccgcaaa
gcagaacagcgcacccgcagcctacgtgtcaagaacgtcccggcagatgcaaccgatggg
ctcttgcaacagacctttgaaaagctggcgcctgttgtgagcgtgcaggttcaagaggga
aagggcgaggcggttgtggaactgaagcatgcctcggacgttgggaaactgttgctcctc
actgagccaattacgttcaacggcgtggccctggggcttagtgaagagtctgcaagcaag
gcgccctccaaacctaacgctgcgttcgtacctcgcgctgctggatccaggccccgagca
ggattggggagcaaaaaagccggaatcggggccatctctgcatcaaatccaccaccagcc
tcagttccagcttccgcttcggctccttcggcaggaggtagcggaaagaatcaagatgat
ttcaggaacatgctcttggggaagaagtaa

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