KEGG   Rhizoctonia solani: RhiXN_00905
Entry
RhiXN_00905       CDS       T09256                                 
Name
(RefSeq) general negative regulator of transcription subunit 3
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
rsx  Rhizoctonia solani
Pathway
rsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RhiXN_00905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsx03019]
    RhiXN_00905
Messenger RNA biogenesis [BR:rsx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     RhiXN_00905
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     RhiXN_00905
SSDB
Motif
Pfam: Not3 NOT2_3_5_C
Other DBs
NCBI-GeneID: 67023187
NCBI-ProteinID: XP_043179736
UniProt: A0A8H8SVN4
LinkDB
Position
4:join(2682838..2682852,2682909..2682915,2682971..2683203,2683261..2683321,2683354..2683776,2683825..2683907,2683967..2684021,2684077..2684141,2684204..2684615,2684667..2684731,2684784..2685075,2685129..2685210,2685263..2685415,2685465..2685669)
AA seq 716 aa
MAARKLQTEIDRTLKKVAEGVELFESIYDKMQASTNQTQKEKLETDLKTQIKKLQRLRDQ
IKTWVASNEIKDKTLLLENRKLIETQMEKFKACEKEMKTKAFSKDEKEKAETSAWLAQQV
EELGRQIEHTEAEIEQLQGGTTRSRRAKATGNGGGRAEELATLNERRKWHVGRLELVMRL
LENNTLQTDAVLALKEHISYFVESNTGEDFEFDEGVYDELNLDEEEEAFRIAGDDNGSEG
EEESVDERSTRPPAKEPKSKAFSLDDDSHSKKDESSPVLKKAAPRKQSIHVESKPPPPQA
TPVKAPPPTAPTKVSLPPIRYAAAAAAAVKNDSPASKESPKPTPSVAHPPPAQSTLGSTQ
TSVTAATSALPTTAPAAPVPSVSATDSPSQHSGQRSPSLASSIVSPAPVLPSLPLEAPPG
IVPPSQPHAESRHQSPVSSRAGADASVDNASVSSPYALSSAALPSTGVSPYISQAITAEP
LPMNGTSNQNNSGANGVSSFPMSASQSMNMPSPLPQQVQAQGPPGFSYDIPQPLSQTAVS
QQQQQQSQQQRQLPSSLSDLVSTFEASKEKAARRDPEQLSKALAAGLEGMPQPQDTSKPK
YYVPRNPYPSQPYYPQQPLTVLSSPALYSQLDVETLFFVFYYLPGTYMQYLAAKELKRQS
WRFHVKYLTWFQRHSEPQAITDEYEQGVYVYFDWEGSWCQRKKSDFRFEYRHLSED
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggcagctcggaagctacaaaccgagatcgaccgcaccctcaagaaggttgcagagggt
gtagaattattcgagtcaatatatgacaagatgcaggcatctacaaaccaaacgcagaag
gagaagcttgaaacggatctcaagacccaaatcaagaagctgcaacgattacgagaccaa
atcaagacgtgggtggccagcaatgagattaaggacaaaacactcttattggagaaccga
aagttgattgaaacacaaatggagaaattcaaggcctgtgagaaggaaatgaagactaag
gccttctccaaagatgaaaaagagaaagcggagacatcagcttggttagcgcagcaagtg
gaggagcttgggcgtcaaatagaacacactgaggcagaaatcgaacagctccaaggtggc
actacacgatcccgacgcgccaaggcgacgggtaatggcggaggaagggcagaagaactt
gctaccctaaatgaacggagaaaatggcacgtcgggcgactggaactcgtaatgcgtcta
ttggaaaacaatactctacaaacggatgcagtattagcgctgaaagaacacatcagttat
tttgtcgagagcaatacgggagaagatttcgaatttgatgaaggcgtgtatgacgaacta
aacttggacgaggaggaggaagccttccgtattgctggcgacgacaatggcagtgaaggg
gaagaagagagcgtggatgaacgatcgacgcgtccaccagcaaaagaaccaaaatccaaa
gctttctcattggacgatgattctcattcaaagaaagatgagagcagtcctgtgttgaag
aaagcggctccgcgtaagcaatctatacatgttgaatctaaaccgccccctccccaagct
actcctgttaaagcaccacctccaacggccccaacaaaagtgtctttgcctcccatacga
tacgcggcagcagctgcagctgcagtaaagaacgattctccagcgtctaaagaatcgcca
aaaccaacaccatcagtagctcatcctcctcccgcacaatccacgcttggttcgacgcag
acatctgttacagctgccacctctgccctacctaccactgcacccgcagcgccggtacca
tcagtttcagccaccgactctcctagccaacactcaggccagaggtctccttctttagcg
tccagcattgtctccccagcgccagtgctaccatcattacctttagaagcacccccaggc
attgtaccgccaagtcagccgcacgctgagtcacgacaccagagccccgtcagtagcaga
gctggtgccgatgccagcgtcgacaacgcaagtgtttcatccccgtatgcccttagtagc
gctgctcttccttctacaggcgtatccccatacatttcgcaagcaattaccgccgaacca
ttgccgatgaatggaacatcgaatcaaaacaactccggggcgaatggggtctcatctttc
ccaatgtcagcgtcacaatccatgaatatgccttccccattgcctcagcaagtacaggcg
caaggcccacccggttttagttatgatatacctcagcctctatcccaaaccgctgtttct
cagcaacagcagcaacagtcgcaacagcaaaggcaacttcccagctctctgagcgacctg
gtctcgactttcgaagcatcgaaagagaaagctgcacgacgggacccagaacaacttagc
aaggctctagcggctgggctcgagggcatgccacaaccacaggacacatccaagccaaaa
tactatgtgccccgtaacccttatccctcacaaccatactacccacaacaacctttgacg
gtactcagttccccagccctctattcccagttggatgtggaaacattattcttcgtattc
tattatcttcctggtacatatatgcagtacttggccgccaaagaactaaagcgccaatcc
tggcgcttccatgtcaagtatctcacgtggttccaaaggcactccgagcctcaagctatc
accgatgagtacgagcaaggcgtatacgtatactttgattgggaaggatcttggtgtcag
cgcaagaagagcgattttaggttcgaataccgtcacttatccgaggactag

DBGET integrated database retrieval system